Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0766 |
Symbol | |
ID | 8418582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 908784 |
End bp | 909425 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645037333 |
Product | peptidase M50 |
Protein accession | YP_003197636 |
Protein GI | 258404894 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.209931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.716111 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGATA TCGCTGAAAT CGTCCGCCAG TTCGCCATAT TGGCCGTCCC GGTCCTTATG GCCATCACCT TCCATGAGGT AGCCCACGGC TATGTCGCCT ACTTACTTGG CGATCCTACT GCCAAACAGG CCGGAAGGTT GACCTTCAAC CCCATCAAGC ACCTCGACCC CATTGGCGCC CTGGCCCTGT TTATCGTCAA AATAGGCTGG GCCAAACCGG TGCCGGTCAA TCCCGCTTAT TTCAGCAACC CCCGACAGGG GATGATTCTC GTCTCTCTGG CCGGACCAGT GACCAACTTT GTGTTGGCGG TGTGTTTCGC CCTGGTGTTC CATGCCCTGT TCTGGCTGTT CGGCCAAAGC GCGTCGGAAC AGGTCATTCG TGTCGTCCAG CCAGTAGTCT ACATGGCCCA GGCCGGGGTG CTGGTGAACA TCGGGCTCGG AATTTTCAAT CTCCTGCCGG TCCCCCCCCT GGATGGGAGC AATATCCTCG CCGGCCTTTT ACCGCCCCGA TACGCCCAGA TCTATCAACA ACAATCCAAA TACGGATTTA TACTCCTGAT CCTCTTGTTT TTGACCGGAG CGGTACAAAA AGTCATTGTC CCGGTCATAT ACGGACTGGC CTCCTTCCTG TTGCCCATGT AA
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Protein sequence | MIDIAEIVRQ FAILAVPVLM AITFHEVAHG YVAYLLGDPT AKQAGRLTFN PIKHLDPIGA LALFIVKIGW AKPVPVNPAY FSNPRQGMIL VSLAGPVTNF VLAVCFALVF HALFWLFGQS ASEQVIRVVQ PVVYMAQAGV LVNIGLGIFN LLPVPPLDGS NILAGLLPPR YAQIYQQQSK YGFILLILLF LTGAVQKVIV PVIYGLASFL LPM
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