Gene Dret_0763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0763 
Symbol 
ID8418579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp903532 
End bp904785 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content61% 
IMG OID645037330 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_003197633 
Protein GI258404891 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase 
TIGRFAM ID[TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAC TCGTTATCGA AGGCGGAGTT CCGCTTCACG GCCATGTGGC CCTGAGCGGA 
TCCAAAAATG CCGCCTTGCC TATATTGCTG GCTGCCATTC TTGTCCCCGA AAAGGTCTGC
TTTGCAAATG TCCCGCCGCT TCGCGATATC ACGACCACGA TCAAATTGCT GCAGCTCCTC
GGGTGCCAGG TCGATCAGGA GGGACCTGAA GTGCGAGTCA CGGCCGGTGA GGGTCTGCAT
CCACAAGCGC CCTACGAATT GGTGCGGACC ATGCGGGCCT CTGTGTTGTG CCTGGGGCCT
CTTTTGGCCC GTCTTGGGGA AGCGGAAGTC TCCTTGCCGG GGGGATGTGC CATCGGGGCC
CGGCCCGTGG ATTTGCATCT CAGGGCCCTG GAACAGATGG GGGCTGAATT CACCCTCAAG
GGCGGGGACA TCAAAGGGCG TTGTGACAGG CTGCGAGGCG CTCGCATTGC TTTTGACTTT
CCCACTGTCG GCGGGACCGA GAATGTGCTC ATGGCCGCGG TCCTGGCCGA AGGCGAGACA
GTATTGGAAA ACGCCGCCAG GGAGCCTGAG ATTACTGATC TGGCCCGGTT CCTGAATGCC
TGCGGTGCCA GGGTTACGGG CCACGGCACC AGTGTTATCC GGGTCCAAGG CGTCACCTCG
TTGCGGGGGA CAGACTACAC AATCATGCCG GATCGGATCG AGGCCGGAAC CTATTTGGCC
GCGGCGGCTA TCACCGACGG CAAACTCGTC CTCGAAAACG GTCAACTGGA GCATATTGAG
GCCGTGGCTG CCAAACTCCA GGAAATGGGG GTGCACATTG AAGAGCGGCC CGAGGGCCTT
GTAGCCAGCC GGGGAAAGGA GCTACACGGA GTGGATGTGA CCACCCAGCC GTACCCGGGG
TTCCCCACGG ACATGCAGGC CCAGATAATG GCTTTGATGG CTATTTCCCA CGGCTCCGGG
TTGATCAAGG AGACGATCTT CGAAAACCGG TTCATGCACG TCTCGGAACT GGTTCGTCTC
GGCGCGGAGA TCAAGCTCTC CGGACAAAGC GCTATGGTTC GGGGCGTGTC TTCCTTGTAC
GGCGCGCCGG TCATGGCCTC GGACCTTCGT GCTTCAGCAT CGCTTGTCCT TGCGGGGCTG
GCGGCCCAGG GCAGGACCGA AGTGCGGCGG ATTTATCACC TCGACAGGGG CTACGTCCGG
ATGGAGGAGA AATTGCGCCA ACTCGGGGCC AGGATTTGGC GCGCTTCAGA ATAA
 
Protein sequence
MDKLVIEGGV PLHGHVALSG SKNAALPILL AAILVPEKVC FANVPPLRDI TTTIKLLQLL 
GCQVDQEGPE VRVTAGEGLH PQAPYELVRT MRASVLCLGP LLARLGEAEV SLPGGCAIGA
RPVDLHLRAL EQMGAEFTLK GGDIKGRCDR LRGARIAFDF PTVGGTENVL MAAVLAEGET
VLENAAREPE ITDLARFLNA CGARVTGHGT SVIRVQGVTS LRGTDYTIMP DRIEAGTYLA
AAAITDGKLV LENGQLEHIE AVAAKLQEMG VHIEERPEGL VASRGKELHG VDVTTQPYPG
FPTDMQAQIM ALMAISHGSG LIKETIFENR FMHVSELVRL GAEIKLSGQS AMVRGVSSLY
GAPVMASDLR ASASLVLAGL AAQGRTEVRR IYHLDRGYVR MEEKLRQLGA RIWRASE