| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0760 |
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| Symbol | |
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| ID | 8418575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 898137 |
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| End bp | 899555 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037326 |
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| Product | selenocysteine synthase |
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| Protein accession | YP_003197630 |
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| Protein GI | 258404888 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.306605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.694521 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGAAT TGTTTCGGAA ATTGCCGGCA ACGGACGATG TTTTGCGCCA ATTGGAGGAT
CTGGACGAAA ATACCGGAAT CCCTCGTCCC ATGCTGCGCG ATGCCGTAAC GCAATTTTTG
GACCGCTGCC GTGAAGCCAT TCGCCGTCAG GAAGTGACCG ACCCCGAGGA ACTCGCTCTG
ACGGCCCTCT TGCCTCGGGC GCAGGAAACG GTCCGTGGCC TGGTTCGCCC CCATTTCCGC
CGAGTCATCA ACGCCACCGG AGTGGTCGTG CATACCAACC TCGGGCGGTC CCTGCTGGCC
CGGGCCGCAC GGGAGGCGGT CGAAGAGTCC TGCCGATTTT ATTCCAATCT CGAATTCGCT
CTGGAAACCG GCAAACGCGG CAGCAGGTAC AGTCACGTCG AGTCCCTGCT GTGTTCTTTG
ACCGGGGCGG AAGCCGCATT GGTGGTCAAC AACAATGCCG CCGCCGTCTT GCTGGTCCTC
GATACGCTGG TCAAAGGCAA GGAGGCTGTG GTTTCACGTG GCCAATTGGT CGAAATCGGG
GGCTCGTTCC GTATACCGGA CGTTATGGCC AAAAGCGGCG GGATTTTGCG TGAGGTGGGG
ACAACGAACC GGACCCATCT GAGCGATTAC GAGCAGGCCA TCGGCCCCGA GACCGGGGCC
CTTATGAAGG TGCACACCTC AAATTACAAG GTGATCGGAT TCCACAAGGA AGTCGGCTTG
CGGGAATTGG CTGTTTTGGG CCGTGAATAC GATCTTCCGG TGATTGAGGA CTTGGGAAGC
GGGAATCTGT TTGACTTTAC GCCCTACGTT CCCCTTGATG AACCGACCGC TCAGTCTGTG
CTGCGCGAGG GGGCTTCAGT GGTGACTTTC AGCGGCGATA AATTGTTGGG AGGGCCGCAG
GCGGGGGTGA TCCTGGGTCG AAAAGACGAG ATCGAGCGGA TCAAACGCAA TCCGCTGAAC
CGGGCCCTGC GAATCGACAA AATGACCCTT GCGGCGCTTG AAGCCACTTT ACGCCTGTAT
ACTGATCCTG CTCGGGCCCG ACGTGAAATT CCGACCCTGG CCATGATCAC GCTGTCTCCG
GAGACAATCC AGGGGCGGGC AAAACGGCTG GCCAGCACAT TGCGGCGGCA GTGGCAGCAG
CACCTGCCGG TTCGTACTCG GGCCGGGTCG TCCCGGGTCG GTGGTGGAGC GAGTCCGGAA
AAGGATCTGC CGACCACGCT GGTGCAGATC CCTTTGCCCG GGAACCGACT CGAACCGTTT
CGCGAGGCGC TTTTGCAAAC GGATCCGCCC TTGGTGGGGC GCATTGAGGA CGGGGCCTTT
TGTCTGGATC CCCGAACGCT GCAAAGCGAA GAACTCCGTG TGGTGCCCGG CCTTTTGGAG
CAAGCGCGCC TGGCCTGTGG GATCGGGGGC GGTCCTTAG
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| Protein sequence | MKELFRKLPA TDDVLRQLED LDENTGIPRP MLRDAVTQFL DRCREAIRRQ EVTDPEELAL
TALLPRAQET VRGLVRPHFR RVINATGVVV HTNLGRSLLA RAAREAVEES CRFYSNLEFA
LETGKRGSRY SHVESLLCSL TGAEAALVVN NNAAAVLLVL DTLVKGKEAV VSRGQLVEIG
GSFRIPDVMA KSGGILREVG TTNRTHLSDY EQAIGPETGA LMKVHTSNYK VIGFHKEVGL
RELAVLGREY DLPVIEDLGS GNLFDFTPYV PLDEPTAQSV LREGASVVTF SGDKLLGGPQ
AGVILGRKDE IERIKRNPLN RALRIDKMTL AALEATLRLY TDPARARREI PTLAMITLSP
ETIQGRAKRL ASTLRRQWQQ HLPVRTRAGS SRVGGGASPE KDLPTTLVQI PLPGNRLEPF
REALLQTDPP LVGRIEDGAF CLDPRTLQSE ELRVVPGLLE QARLACGIGG GP
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