Gene Dret_0752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0752 
Symbol 
ID8418566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp887549 
End bp889450 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content55% 
IMG OID645037317 
Productheat shock protein 90 
Protein accessionYP_003197622 
Protein GI258404880 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC AGCACAGTGA ACAATACGAA TTCAAAGCGG AAATCAAGAA ACTGCTGGAT 
ATCATCATCC ACTCCCTTTA CACCCACAAG GAAATCTTTC TCAGGGAGCT TATTTCCAAT
GCCTCCGACG CCCTGGACAA GGCCCGGTTT GAACAAAGCC GCTCAACAGA GATGGCCAGC
GCCGATGCTG AACTCGCCAT CACCATTACC ACAGATGCGG AGGGGAAACG GCTGACCATT
ACGGACTCTG GCATCGGGAT GGATAAAGAC GAGGTCGTAG ACAATATCGG GACCATCGCC
CATTCCGGCT CAGCCGAATT TTTGCGCAAG GTCGCCGAAG ATCAGGCCCA GCCGGACAAT
ATCATCGGCC AATTCGGTGT CGGATTCTAT TCCGTATTTA TGGTCGCCGC CGAAGTCACC
CTTACCAGCC GCTCCCACCA TCCGGATGCC AAGCCGGTCC GCTGGCACTC CGACGGCTTG
GGCAGCTACA CCATCGAGGA ACTTGACGAG GACCTGCCCC GCGGGACGAG CATCGAAATC
GTTCTGCGCG AAGGAGAAGA AGAGTACGCG GAGAAAGAAC GCATCGAAGC GATCATCAAA
CGCCACTCGA ATTTCATCTC CTTTCCCATT TTCGTCGACG GGGAAAAGGT CAACACCATC
CCGGCCTTAT GGCGCGAACC GCGCTTCAAC GTCAAAAAAG AACAATACAC TGAATTCTAT
AAGTTCCTGA CCTACGACAC CGAAGAACCG TTCGAGACCC TGCATATTTC CGTCGACGCC
CCGGTCCAGT TCAACGCCCT GCTCTTTATC CCCCAGAAAA GCCCCATGCT TTTCGATGTC
AATAACATCG AATATGGGCT TGATCTCTAT GTCCGGCGGG TTCTTATCCA ACGGGAAAAC
AAGGAACTCC TGCCGCAATA TCTTGGATTT ATCAAGGGGG TGGTGGACAC CGAGGATCTG
CCCCTCAACA TCTCCCGGGA GAACATCCAG GAGAATGTCC TGATCCGCAA GATCGCGGCC
AATATCCACA AACAGATCCT CGACCGCTTG TTGAAAATCG CCAGCAACGA GCCCGAACGC
TACGAGCAAT TCTGGCGGGA ACACAACAAA CTGTTCAAAC TTGCCTACGC CCAGTTTGAA
CACCAAGACA AGATCAAGGA CCTGGTCCGC TTCAATTCCT CCCACTGCGA GGACGCCTCG
GGCCTCGTCT CTCTGCAGGA CTACGTCGAG CGCATGCCCG AAGGGCAAAA CGAAATCTAC
TACATTTCCG GGCAAAGCCG TGAGGCCATC GAATCCAGTC CCCACCTGGA AATTCTGAAA
CGCAAGAATC TCGAAGTCCT CTATCTTTTC GAACCCATCG ACGAGTTCGT CCTTGAATCT
CTGCGCGCCT ACGGTGAACA TGCCTTTGTT GCCGCTGAGC ATGCTGACCC GGCCCAGTTG
GAGGCCATCA GCAGTGATGA AGAGGAGTCC AAAGAGGAAC TGACCGAAGA GGAACAGCGC
GACATCGACG GTCTGCTCAA GGCCATGCAG GACATCCTTG GCGACCGGGT CACCGAGGTC
CGCAGTTCCA AGCGGCTCCA CAACAGCCCG GCCTGTCTCG TGAACCCAGA TGGAGGCATG
TCCTCGCAGA TGCAGAAGAT CATGCACCTC GTCAACAAGG ACGAATCGAT CCCGCAAAAG
GTCCTGGAAA TCAATCCCCA GCACCAGCTG ACACGCAATC TGCTGCACAT CTATCAGCAG
GAAGGCAGCA ACGACTTTAT CCGCAAGACC ACGGAGCAAT TGTTCGAATC CGCCTTGCTC
CTCGAAGGGT ACCTGAATGA CCCGCACGCT CTGGTCAACA GGACCTTCGA ACTGCTCCAG
CAGTCCAGCG GCTGGTACGC CGAAGCCCAC CAGAAAGAGT AG
 
Protein sequence
MSEQHSEQYE FKAEIKKLLD IIIHSLYTHK EIFLRELISN ASDALDKARF EQSRSTEMAS 
ADAELAITIT TDAEGKRLTI TDSGIGMDKD EVVDNIGTIA HSGSAEFLRK VAEDQAQPDN
IIGQFGVGFY SVFMVAAEVT LTSRSHHPDA KPVRWHSDGL GSYTIEELDE DLPRGTSIEI
VLREGEEEYA EKERIEAIIK RHSNFISFPI FVDGEKVNTI PALWREPRFN VKKEQYTEFY
KFLTYDTEEP FETLHISVDA PVQFNALLFI PQKSPMLFDV NNIEYGLDLY VRRVLIQREN
KELLPQYLGF IKGVVDTEDL PLNISRENIQ ENVLIRKIAA NIHKQILDRL LKIASNEPER
YEQFWREHNK LFKLAYAQFE HQDKIKDLVR FNSSHCEDAS GLVSLQDYVE RMPEGQNEIY
YISGQSREAI ESSPHLEILK RKNLEVLYLF EPIDEFVLES LRAYGEHAFV AAEHADPAQL
EAISSDEEES KEELTEEEQR DIDGLLKAMQ DILGDRVTEV RSSKRLHNSP ACLVNPDGGM
SSQMQKIMHL VNKDESIPQK VLEINPQHQL TRNLLHIYQQ EGSNDFIRKT TEQLFESALL
LEGYLNDPHA LVNRTFELLQ QSSGWYAEAH QKE