Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0744 |
Symbol | |
ID | 8418558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 877754 |
End bp | 879088 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645037309 |
Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
Protein accession | YP_003197614 |
Protein GI | 258404872 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACGGTT TGCTGCATCC CGGACAACTT AAAGGGCATT GCGCCGCAGT GCTCGGAGCC GGTCGGTCCG GCTTGGGAGC CGCCCGGCTT TTGGATTTTC TCGGGGCGGA TATCCGTTTG CTGGAAAAAT CCCCTGAGCG TCTTTCGTCC GACGTGGAGC AGGAGGCCCA AACCAAGGGA TGGACGGTGC GGACCGGGGA GCATGCGGCG GCGGATTTTG ATGGCGTGCA GATGGTGGTC CCGAGCCCAG GTGTGCCGGT ACACCGTCTG GTCCATTTAT TTCCTCAGAC GGTGCAGATC ATCTCCGAAC TCGAACTCGC CTCCTGGTTC GTCAATGAAC CGATTGTCGC AGTCACCGGT TCGGCGGGGA AGACCACAAC GACGACCTTG ATTGCCCATA TTCTGGAAAC GGCCGGGCGC CGGGTCTTCA GTGGTGGAAA TCTGGGCACG CCCCTCTCGG AATATGTCCT CGCTCAGGAC CAGGCCGACG TGCTGGTTTT GGAAGTCAGC AGTTTTCAGC TTGTCCATGC CAGCAGTTTC CACCCTAAGG TGGCTGTCTT GCTCAATGTG GCCCCCAATC ATCTCGATTA CCACGAGGAG ATGGAAGCCT ATGTCCTGGC CAAGCTCAAA CTCTTCGCCA AACAGCAGCC TGGAGATTTG GCCATCGCGC CGTATGCGTT GAAAGAGGAT CTTGAAAGCC GCCACTTCTC AGCAGCCGAC CGGGTCTATT TTGTTCCCAA TGATCGTTTT TCTTGTCCCC AACTGCCGGG GGAACACAAT CAGGCCAATA TTGAGGCCGC CTATCTCGCC TGCCGTTATC TTGGTGTTGA CGAACAGGCT GTGGCTGAGG CGCTGGCCAG CTATCAGCCC CAGGCGCATC GCCTGCAGAT CGTCGGGACC TGGAACGGGG TGAAAGTGGT GGACGATTCC AAAGCCACGA CCATCGAGTC CCTCCAGGCC GCTTTACGCA GTTTCGAGGA ACCGATCGTT CTGTTGGCTG GCGGCCAGTT CAAGGGGGGC GATCCAAGCC TGGTGGCGGA TTTGATCCGT ACCAGGGTCA AAGAAGTGGT CCTTTTTGGC GACAATCGCG ACGTTTTTGA ATCGGCCTGG CAGGGGCTGG CACCGATGCG TTGGTTCCCG ACCCTGGAAG ATGCCGTGGA TCATGGAGCC ACAACAACCC AATCCGGGGA TGTGCTTCTC TTGTCCCCGG CCACGGCCAG TTTCGATCTG TTTACCGATT ACAAGCACCG CGGGGCGGTC TTCCAGGAAG CCGCCCGGCG GTGCCTGACA ACAGCAGCAG GTGGACCCTC GGATGGCGCA CCAACCGCGC AATAG
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Protein sequence | MHGLLHPGQL KGHCAAVLGA GRSGLGAARL LDFLGADIRL LEKSPERLSS DVEQEAQTKG WTVRTGEHAA ADFDGVQMVV PSPGVPVHRL VHLFPQTVQI ISELELASWF VNEPIVAVTG SAGKTTTTTL IAHILETAGR RVFSGGNLGT PLSEYVLAQD QADVLVLEVS SFQLVHASSF HPKVAVLLNV APNHLDYHEE MEAYVLAKLK LFAKQQPGDL AIAPYALKED LESRHFSAAD RVYFVPNDRF SCPQLPGEHN QANIEAAYLA CRYLGVDEQA VAEALASYQP QAHRLQIVGT WNGVKVVDDS KATTIESLQA ALRSFEEPIV LLAGGQFKGG DPSLVADLIR TRVKEVVLFG DNRDVFESAW QGLAPMRWFP TLEDAVDHGA TTTQSGDVLL LSPATASFDL FTDYKHRGAV FQEAARRCLT TAAGGPSDGA PTAQ
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