Gene Dret_0743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0743 
SymbolmraY 
ID8418557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp876668 
End bp877744 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content56% 
IMG OID645037308 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_003197613 
Protein GI258404871 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTACC ACCTGCTCTA CCCGTTGGCT GAATATGTCG GCTTGTTCAA CGTGTTCCGG 
TACATCACGT TTCGCTCCAT TTATGCCTTT TTAACGGCCC TTATTATCAG CATCGTCATT
GGCCCACGGT GTATCGCCTG GCTGCAAAAG GTCAAATGCC GGCAATTCAT TCAGGAGGAC
GGCCCGGCTC ACCACGAAAA GGCCGGCACC CCGACCATGG GAGGACTGCT GATAGCCATG
AGCCTGATCG GCAGTGTCCT GTTGTGGGCC GATTTGACCA ATCTCTACGT GTGGTTGGCC
TTGTTTTTGT TCGCCGGGTT TGGAGCTATC GGCTTTGCTG ACGACTATCT CAAGGTCATC
AAACGCCGCA ATATGGGGCT TTCTGCACGG AGCAAATTTC TGGGCCAGGT GGTGATCGCC
GTTGTGGTGG TCGGGGTGCT GATCACTTTG CCGGGATACT CCACCCAATT GTCCCTGCCG
TTTATTAAAT GGCTCCGGCC TGACTTGGGC TGGCTGTACA TCCCGTTCGC TATTCTGGTC
ATGGTCGGCT CCTCGAATGG GGTTAACCTG ACCGACGGCC TGGATGGGCT GGCCATCGGC
CCCACGGTGG TGGCTGCAGC GTGTTTCACC ATTTTTATAT ACGTGGCCGG GCATGCCGAA
CTCGCGGATT ATCTCCAGGT GCCTTTTGTA ACCGGTGTCG GGGAAGTGAC CATTTTCTGC
GGGGCCATGG TCGGGGCCGG TCTCGGGTTT CTCTGGTACA ACGCCTATCC GGCGCAAGTC
TTTATGGGCG ATGTGGGGAG CCTAAGCCTC GGCGGCGCGC TCGGATTCGT GGCCATCCTG
AGCAAGCAGG AACTCCTGCT GGTCCTCGTC GGAGGGTTGT TCGTCATCGA AACCCTCTCG
GTTATCCTGC AGGTCGGGTA TTTTAAATTC AGTGGCGGCA AGCGGATATT CCGAATGGCC
CCACTGCACC ACCATTTTGA GAAGCAGGGG GTGCCGGAAT CCAAAATCAT CGTTCGTTTC
TGGATCCTGT CCATCCTTTT TGCCCTGGTT GCCTTGAGCA CCTTGAAATT ACGTTAA
 
Protein sequence
MIYHLLYPLA EYVGLFNVFR YITFRSIYAF LTALIISIVI GPRCIAWLQK VKCRQFIQED 
GPAHHEKAGT PTMGGLLIAM SLIGSVLLWA DLTNLYVWLA LFLFAGFGAI GFADDYLKVI
KRRNMGLSAR SKFLGQVVIA VVVVGVLITL PGYSTQLSLP FIKWLRPDLG WLYIPFAILV
MVGSSNGVNL TDGLDGLAIG PTVVAAACFT IFIYVAGHAE LADYLQVPFV TGVGEVTIFC
GAMVGAGLGF LWYNAYPAQV FMGDVGSLSL GGALGFVAIL SKQELLLVLV GGLFVIETLS
VILQVGYFKF SGGKRIFRMA PLHHHFEKQG VPESKIIVRF WILSILFALV ALSTLKLR