| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0741 |
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| Symbol | |
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| ID | 8418555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 873832 |
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| End bp | 875298 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645037306 |
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| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
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| Protein accession | YP_003197611 |
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| Protein GI | 258404869 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTCAAG ATCGTCCTTT GCTAACGACC TGGCCAGCAG TGCTGGACTA TGTGGCAGCG
GGCCACCGGG CCCGGATAGA TTCGCGGCAG GTGGAGCCCG GCGATGTCTT TGTGGCGTTG
CCCGGCAGCA CGGTTCATGG CAGCGATTTC GCCCCCCAGG CCCTAAAGCG GGGGGCGGCG
GCGGTCGTTG CAGCCCCGGG AACGCTGCCA GCCACTCTGT CGCAACAAAA CTGCGTTGTG
CATGACGATC CCCGCGAGGC GCTCGGGGCC TTGGCCGAAG CGCATTTCGG CACCTCGCGC
CTGGGGCTTG AACTCATCGG CGTGACCGGC ACGAATGGCA AGACAACGGT GGTCGGTCTG
CTTGAATACG CCTTGCAGCG GATGGGGCGC CGGGTCGGCG TGATCGGCAC CATCGCCAAC
CGGTGGCCGG GGCATGAAGA GCCGGCGGCT TTGACAACGC CGGGGTGCTG GGATCTGCAC
GCCTGCTTGT CCCGCATGGC TGCCGATGGC GTGGACACGG TCTGTATGGA GGTCTCGTCT
CACGCCTTGG CGCAGCGGCG CACGGCCGGT CTCCGTTTTT CTGCCGCAGT GCTGACCAAT
GTCTCTCAGG ACCATCTCGA CTACCACCGG GATATGGAGA GCTATTTTAC GGCCAAATCA
ACATTGTTCA ATCCCTCGCA CCTTACGGAA AACGGTGTGC GGGTCATCAA TGCCGACGAT
CCGTATGGCC GGCGCCTGCG AACCGGTTTT CCCGGCGCCT GGGGGTATTC GCTCCACTCC
GAAAAGGCGC AGGACCCGTT GTTGGTGGAG GCCTCAGTCG CCGGCATGGA CCGCAAGGGC
ATCCGGCTCT CCTGTCTCTG GCAGGGGCAA CAATGGGTGC TGCCTTCGCC GCTGGTTGGA
CGGCATAACG GCGCCAATCT TATGGCGGCC CAGGCCACCT TGCTCGCCCT TGGCTTTGGG
CCCGCAGATG CCGCAGTCTT AAGCGATGCT CCTCCGGTGC CGGGCCGGCT GGAGCGAGTG
GAGAACGCCG CGGGGCTCGA TATTTTTGTG GATTATGCGC ATACCCCGGA TGCCCTGGAG
AATGTTCTGC AGGCCATGAC CGCTCTCGAT GGGAACCGGC TGCTGGTGGT TTTCGGTTGT
GGCGGTGATC GCGACCGGAC GAAGCGCGTT CCCATGGGCC AAGCCGTCGC CCGGTATGCC
GATGTGGCGA TCTTGACCTC AGACAATCCC CGGCACGAAG ACCCTGAGGC TATCATGGCC
GACGTCCGGC CCGGCCTTGC CGATTGTCCG CGGGTTGTCG AGGAGAGTGA CCGGAAAGCC
GCCATTGCCC TTGCCCTGCA GGAAATGGTG CCCGGCGACA TCCTTGTGGT GACCGGCAAA
GGCCACGAAA CATATCAAGA TATCGGTGGT GTCCGGGTGG AGTTCAGCGA TATCCGGGCC
ATTTGTGAGC AGATCCAATG CAATTGA
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| Protein sequence | MPQDRPLLTT WPAVLDYVAA GHRARIDSRQ VEPGDVFVAL PGSTVHGSDF APQALKRGAA
AVVAAPGTLP ATLSQQNCVV HDDPREALGA LAEAHFGTSR LGLELIGVTG TNGKTTVVGL
LEYALQRMGR RVGVIGTIAN RWPGHEEPAA LTTPGCWDLH ACLSRMAADG VDTVCMEVSS
HALAQRRTAG LRFSAAVLTN VSQDHLDYHR DMESYFTAKS TLFNPSHLTE NGVRVINADD
PYGRRLRTGF PGAWGYSLHS EKAQDPLLVE ASVAGMDRKG IRLSCLWQGQ QWVLPSPLVG
RHNGANLMAA QATLLALGFG PADAAVLSDA PPVPGRLERV ENAAGLDIFV DYAHTPDALE
NVLQAMTALD GNRLLVVFGC GGDRDRTKRV PMGQAVARYA DVAILTSDNP RHEDPEAIMA
DVRPGLADCP RVVEESDRKA AIALALQEMV PGDILVVTGK GHETYQDIGG VRVEFSDIRA
ICEQIQCN
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