| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0731 |
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| Symbol | |
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| ID | 8418545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 863059 |
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| End bp | 864087 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645037296 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_003197601 |
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| Protein GI | 258404859 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00683582 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAAGG CCAGGATCTG GAAACCGCTG ACGGACAAGA GGGTCCAATG CCGGCTGTGC
AGCCATTTCT GCCGAATTGA GCCCAATGAG CGCGGCCATT GCGGTGTCCG CTGCAATAGT
GACGGCGCCC TGTACACGCT GGTCTACGAC AGGATAGCGG CACTGAATAT CGATCCCGTG
GAAAAAAAAC CGCTCTTCCA CTTCTGGCCG GGGTCAAGCA CTTTGTCCTT GGGCACCATG
GGCTGCAACC TCTCCTGCGC CTTTTGCCAA AACTATTCCC TGTCGCAGCC TCCACGCCAG
GGGCAACCGA TCTACGGCCG TCCGACCTCC CCCCAGGAAC TGGTCCAGGA AGCCCTGGCC
CAGGAGGTTA CGAGTCTGGC CTATACCTAT TCCGAGCCGA CGATTTTTTT TGAACTCGTG
GAAGATACCG CCCGTTTGGC AAAAGAATAC GGTTTGAAAA ACATCATTGT CAGCAACGGA
TTCATGAGCA GGGAATGCCT GGAAAACTGG GATGGACTCA TCGATGCCGC GAACATCGAT
CTGAAGTCGT TCCGGGAGGA CTTCTACACC CGACTCTGCG GCGCCAAGCT CAAGCCGGTC
CTGCATGCGC TGCGAACCGT CGCTGAACTC GGTTGGCATC TGGAAGTCAC CACTTTGATC
ATCCCCGGGG AAAACGACAG CGACAGCGAA CTCAGCGAAT TGGCCGGCTT TATCGCCGAG
GAACTCGGCC CCCACGTCCC TTGGCATATT TCCCGGTTCC ATCCGGCATT TCAAATGGAC
CACACGCCGC CCACTCCTTT GCAGACCCTG CAGCGAGCTT ATGAACTCGG TACGCAGGCG
GGACTGGACT ACATTTATAT TGGCAATATG CCCGGTCACG AATCTGAATC GACCTATTGC
CCGCAATGCA AGGCCCTGGT CGTCAAACGG CGCGGATTCG CCTTGCAAAA ACAGGCCCTG
CAAAACGGCC GCTGCGCCAA ATGTGGCCAC CCGATCCCCA TCGTCGGCCT GGGCCAGAAC
GCAAAATAG
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| Protein sequence | MHKARIWKPL TDKRVQCRLC SHFCRIEPNE RGHCGVRCNS DGALYTLVYD RIAALNIDPV
EKKPLFHFWP GSSTLSLGTM GCNLSCAFCQ NYSLSQPPRQ GQPIYGRPTS PQELVQEALA
QEVTSLAYTY SEPTIFFELV EDTARLAKEY GLKNIIVSNG FMSRECLENW DGLIDAANID
LKSFREDFYT RLCGAKLKPV LHALRTVAEL GWHLEVTTLI IPGENDSDSE LSELAGFIAE
ELGPHVPWHI SRFHPAFQMD HTPPTPLQTL QRAYELGTQA GLDYIYIGNM PGHESESTYC
PQCKALVVKR RGFALQKQAL QNGRCAKCGH PIPIVGLGQN AK
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