| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0728 |
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| Symbol | |
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| ID | 8418541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 859871 |
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| End bp | 860989 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645037292 |
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| Product | thiazole biosynthesis protein ThiH |
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| Protein accession | YP_003197598 |
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| Protein GI | 258404856 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR02351] thiazole biosynthesis protein ThiH |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00541403 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATTTG CCGATATCCT GGAACAATGG CCCGCGGATC GAGTAGAGGC GTTTTGCCGT
ACCCGAAGTT CTGCAGATGT CCGGCGAGCC CTGCAGACAA TTCGCCTCAG AGCTGAGGAG
TATTTGACCC TGCTGTCGCC CGCGGCCCAG GACCATCTGG AGGCCATGGC CCGCCGAGCC
CAGGCCGAAA CCCGACGGAA CTTCGGCCGT GCCATTGTCC TGTTCACCCC ATTGTATCTC
TCGAATTATT GCCAGAACCA ATGTGTTTAC TGCGGCTTCA ACGCCGCTCA ACCCATTGCC
CGGCGCAAGC TCGAGGACCG GGAAGTGGAA GCCGAAGCCG AAGCCATCGC CGCCACTGGT
CTGGGCCATT TGCTTCTTCT CACCGGTGAG GCCCCGCAAC TCGCCGGAGT CGAGTATCTG
GAGCGGTGCC TGCGTCAGTT GACCCGGTGG TTTTCTTCGG TTGCCCTTGA AGTTTTTCCC
ATGGGGCGCA CGGAATATGC CCGTTTGGTC CGGGCGGGGG CGGATGGATT GACCTTGTAT
CAGGAAACCT ATGACCGGGA GCTGTATGCA GCGCTCCATC CGGCCGGACC GAAACGGGAT
TTTGATTTCC GCCTCGGGGC CCCGGAGCGG GCGTGTCAGG CCGGTATGCG ATCCGTGAGC
CTTGGAGCGC TTTTGGGATT GGGGGCTTGG CGGCACGACT CCTTTGCGAC CGGTTTGCAC
GCCGCTTTTT TGCAACACCG GTATCCCGGG GTGGAATTGG CCGTTTCCCT GCCCCGGATG
CGGCCGCATT GCGGCGGGTA TGAGCCGGCC CATCCGGTTT CGGATCGGGA ACTGGTCCAG
ATCATGCTGG CCCACAGGCT TTTTCTGCCC TATGCGGGCC TTACCCTTTC CACCCGGGAG
AGCGCTGCCC TGCGGGACAA TGTCCTGGAA CTGGGGGTGA CGAAATTGTC GGCAGGATCA
GTGACTGCGG TCGGCGGGCA CACGGACGGC CCTGAGACCG AGGGACAGTT CGACATCGCC
GACACTCGCG ATGTGGCAAC CCTGTCCAAT GCTTTGCGTG CTCGGCATTT CCAGCCGGTG
TTCAAGGATT GGGAGCCGCT TCTGGAGACC GGGACGTGA
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| Protein sequence | MEFADILEQW PADRVEAFCR TRSSADVRRA LQTIRLRAEE YLTLLSPAAQ DHLEAMARRA
QAETRRNFGR AIVLFTPLYL SNYCQNQCVY CGFNAAQPIA RRKLEDREVE AEAEAIAATG
LGHLLLLTGE APQLAGVEYL ERCLRQLTRW FSSVALEVFP MGRTEYARLV RAGADGLTLY
QETYDRELYA ALHPAGPKRD FDFRLGAPER ACQAGMRSVS LGALLGLGAW RHDSFATGLH
AAFLQHRYPG VELAVSLPRM RPHCGGYEPA HPVSDRELVQ IMLAHRLFLP YAGLTLSTRE
SAALRDNVLE LGVTKLSAGS VTAVGGHTDG PETEGQFDIA DTRDVATLSN ALRARHFQPV
FKDWEPLLET GT
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