Gene Dret_0727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0727 
Symbol 
ID8418540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp858946 
End bp859731 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content62% 
IMG OID645037291 
Productthiazole biosynthesis family protein 
Protein accessionYP_003197597 
Protein GI258404855 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2022] Uncharacterized enzyme of thiazole biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000329122 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGAGG AAATGGAAGG AGCGCCGTTG AGTATCGGCG GGACGGCGCT TTCGTCGCGA 
TTGTTTATTG GAACCGGGAA GTACGGCAAC GATAGCCTGA TCCCCGACGT GGTCCGCGTC
AGCGGAGCAC AGGTTATCAC CGTGGCCCTG CGCCGGGTCG ACTTTGCGGC CCAGCACGAC
AATGTCATGC AGCATATCCC CGAGGGAATG CGCCTTTTGC CTAATACCTC GGGCGCGCGC
ACGGCACAGG AAGCGGTGCG GATCGCCCGC TTGGCCCGGG CTGCCGGATG CGGAGACTGG
ATCAAAATCG AAGTCATCGA TGACTCGCGG TATCTCCTGC CCGACGGATA CGCAACAGCC
AAGGCCACTG AACAATTGGT CAAAGAGGGA TTTACGGTCC TGCCGTATAT CAATCCGGAT
CTCTATGTGG CCCGGAGCTT GGTCAATGCC GGAGCAGCGG CGGTCATGCC CCTCGGAGCC
CCCATTGGCT CCAATCGGGG GCTCAAGACC AGGGAAATGG TCCGCATCCT CGTCGATGAG
ATCGATGTCC CGGTCATCGT GGACGCCGGT TTGGGATTGC CGTCCCATGC CTGTGAGGCG
ATGGAGCTTG GGGCCGACGC CTGTCTGGTC AATACCGGCA TCGCCTCGGC TGCAGATCCT
TTGCGGATGG CCGCAGCGTT TGCCGCCGGT GTCCAAGCCG GCCGCGATGC CTGGCTGGCT
GGCCGCGGTG TATCGTCTGC GCAGGCCCAG GCCTCTTCGC CGCTGACCGG GTTTCTCGAT
GGATAA
 
Protein sequence
MVEEMEGAPL SIGGTALSSR LFIGTGKYGN DSLIPDVVRV SGAQVITVAL RRVDFAAQHD 
NVMQHIPEGM RLLPNTSGAR TAQEAVRIAR LARAAGCGDW IKIEVIDDSR YLLPDGYATA
KATEQLVKEG FTVLPYINPD LYVARSLVNA GAAAVMPLGA PIGSNRGLKT REMVRILVDE
IDVPVIVDAG LGLPSHACEA MELGADACLV NTGIASAADP LRMAAAFAAG VQAGRDAWLA
GRGVSSAQAQ ASSPLTGFLD G