Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0727 |
Symbol | |
ID | 8418540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 858946 |
End bp | 859731 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645037291 |
Product | thiazole biosynthesis family protein |
Protein accession | YP_003197597 |
Protein GI | 258404855 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2022] Uncharacterized enzyme of thiazole biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000329122 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGAGG AAATGGAAGG AGCGCCGTTG AGTATCGGCG GGACGGCGCT TTCGTCGCGA TTGTTTATTG GAACCGGGAA GTACGGCAAC GATAGCCTGA TCCCCGACGT GGTCCGCGTC AGCGGAGCAC AGGTTATCAC CGTGGCCCTG CGCCGGGTCG ACTTTGCGGC CCAGCACGAC AATGTCATGC AGCATATCCC CGAGGGAATG CGCCTTTTGC CTAATACCTC GGGCGCGCGC ACGGCACAGG AAGCGGTGCG GATCGCCCGC TTGGCCCGGG CTGCCGGATG CGGAGACTGG ATCAAAATCG AAGTCATCGA TGACTCGCGG TATCTCCTGC CCGACGGATA CGCAACAGCC AAGGCCACTG AACAATTGGT CAAAGAGGGA TTTACGGTCC TGCCGTATAT CAATCCGGAT CTCTATGTGG CCCGGAGCTT GGTCAATGCC GGAGCAGCGG CGGTCATGCC CCTCGGAGCC CCCATTGGCT CCAATCGGGG GCTCAAGACC AGGGAAATGG TCCGCATCCT CGTCGATGAG ATCGATGTCC CGGTCATCGT GGACGCCGGT TTGGGATTGC CGTCCCATGC CTGTGAGGCG ATGGAGCTTG GGGCCGACGC CTGTCTGGTC AATACCGGCA TCGCCTCGGC TGCAGATCCT TTGCGGATGG CCGCAGCGTT TGCCGCCGGT GTCCAAGCCG GCCGCGATGC CTGGCTGGCT GGCCGCGGTG TATCGTCTGC GCAGGCCCAG GCCTCTTCGC CGCTGACCGG GTTTCTCGAT GGATAA
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Protein sequence | MVEEMEGAPL SIGGTALSSR LFIGTGKYGN DSLIPDVVRV SGAQVITVAL RRVDFAAQHD NVMQHIPEGM RLLPNTSGAR TAQEAVRIAR LARAAGCGDW IKIEVIDDSR YLLPDGYATA KATEQLVKEG FTVLPYINPD LYVARSLVNA GAAAVMPLGA PIGSNRGLKT REMVRILVDE IDVPVIVDAG LGLPSHACEA MELGADACLV NTGIASAADP LRMAAAFAAG VQAGRDAWLA GRGVSSAQAQ ASSPLTGFLD G
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