Gene Dret_0719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0719 
Symbol 
ID8418532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp853694 
End bp854107 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content45% 
IMG OID645037283 
Productheat shock protein Hsp20 
Protein accessionYP_003197589 
Protein GI258404847 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00433386 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.504335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAATCG ATTTTAGTTC TTTTTACGAT CTGCCTCGTA GTATGGAGCA ATTGTTCGAT 
AATTTCTGGC AACCATCTTC GTTTCCCCAG CGGCGTCAAG CCTTCCCTCC GCTGAATATC
AGTGAAGACA GTGAAAATGT CTATGTTCGA GCTGAAATGC CGGGGCTGCA TGTTGAAGAT
GTTGATCTGA CTTTGACTGA CAACAGCTTG ATCATTAAAG GTGAACGAGT TCAGGAGGAG
GGGAAATATT TTCGCCAAGA GCGCGCCGCA GGCGTTTTTC AGCGCCTTGT CAATTTAAAT
GTTCCTGTCC AAAGAGATAA TATCAGCGCG ACAATGCGCA ATGGAATTCT TGAAATTCGC
TTGCCGAAAT CAGAAGAGAT CAAGCCAAAG AAGATAAGTA TCGATGTGGG GTAG
 
Protein sequence
MVIDFSSFYD LPRSMEQLFD NFWQPSSFPQ RRQAFPPLNI SEDSENVYVR AEMPGLHVED 
VDLTLTDNSL IIKGERVQEE GKYFRQERAA GVFQRLVNLN VPVQRDNISA TMRNGILEIR
LPKSEEIKPK KISIDVG