| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0712 |
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| Symbol | |
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| ID | 8418525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 846532 |
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| End bp | 848067 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645037276 |
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| Product | integral membrane protein MviN |
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| Protein accession | YP_003197582 |
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| Protein GI | 258404840 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.83297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.491449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACA CGCGAAAAAT CGCCCGCAAC GCTTCTGTCG TCGCTGGGGC CACTTTGTTG
AGCCGGGTCC TGGGATTTGT GCGCGATGTG GTCATCGCCT TTGCCCTGGG CGCAGGCCCC
CTGGCCGACA GTTTCTTTGT CGCCTTCCGT CTCCCCAATC TCCTGCGCCG CCTGTTTGCC
GAAGGGTCGT TGACTATGGC CTTTGTTCCG GTCTTTACTC GCAGTGACCG GTTCGACGGG
CAGGACGAAG CCTTTGCAGT GGCGCGTTCG ACCGCGTTGT GGCTGCTCCT TCTCCTCGGT
CTGCTGATGG GCGTGGCCAT CGTCGCGGCC AGGCCGTTGA CTCTTGTTAT CGCCCCGGGA
TTTGCGGATA CTCCGGAGGT CGTGAATCAT ACCGCCCTTC TGGTGCGGAT CTGTTTTCCC
TATATCCTGT TTATCTCCGG AGTCGCCCTG TGCATGGGCA TTCTCAATGC CCGGGACCAT
TTTCTCGCTC CGGCGCTGGC GCCGTGCGTG CTCAATGCGG TGTTGATCAC CGCTTCGTTG
GCGGCGGTCG CCTTGGGGTG GCCGGTGCCA ACGACCCTGG CCTTGGCCGT TCTTGTCGCT
GGACTGGGGC AGTGGCTGCT CCAGCAGCCC TTTTTGCGCC GGCAAGGATT CTCCTGGTTC
GGACCGGCCT CTTTGCGCCA CCCCGGGGTG CTGCGCATCG GCCGGTTGAT GCTCCCGACT
GTTGTCGGGG CTGCAGTCTA TCAATTGAAC ATCGTTCTGG GAACCGTTCT GGCGTCGTTC
TTGAGTCTGG GAAGCATCTC CTTTCTGTAT TATGCCGACC GGCTGGTGCA GTTCCCCCTG
GGGGTCTTCG GGATCGCAGT CAGCCAGGCC GCCTTGCCGA GCTTTTCTCG TCTGGCCGCT
GACGGCGCGC ATGAGGACCT GCTGCAGACG TTGAATAAGA CTCTGGGATT GCTCCTTTTT
ATCAGTCTCC CGTCGGCTGC CGGCTTGATA GCGCTCTCAG AGCCGATGGT GGCGACCCTT
TTTGGCCGCG GCGCGTTTAG TGCTGAAGCG GTGCAGGCTA CGGCCTGGGC TTTGGTCGGC
TACAGCACAG GGCTCCCCGC TTTTTGTTGC GTGCGCTCGC TGGTCTCGAC CTATTACGCC
CTGGAGGATA CCAAAACTCC GGTCAAGATC GCCACCCTCT GCCTGCTTCT CAACGGGGGG
CTCGGTCTGC TGCTCATGCA ATTCTGGGCC CATGTCGGCC TGGCATTGGC GGTGGCCCTG
GCCTCTTGGG CGAATGTTGT GTTGTTGCTG CGGGGATTGC GGGCCCATTT TAACGGACCG
TGGATGGCGG TTCCCGGCGT CGTCCGCATG CTCGGCCTGA GCCTGCTGGT GGGCGTCGGC
GCCTGGGTCA CGGCCGGGTG GGGCGGCTGG GCGCTTTTGG GGATCCCGTT CTGGGCCGCG
GTCTATCTCG GTGCGGCCGG GATGTTGGGC ATGCCGGAGA CCGAACTCTT TTTTGACGGG
ACTCGGCAAG TGCTGCGACG GGTGGGGAAG CGGTGA
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| Protein sequence | MSHTRKIARN ASVVAGATLL SRVLGFVRDV VIAFALGAGP LADSFFVAFR LPNLLRRLFA
EGSLTMAFVP VFTRSDRFDG QDEAFAVARS TALWLLLLLG LLMGVAIVAA RPLTLVIAPG
FADTPEVVNH TALLVRICFP YILFISGVAL CMGILNARDH FLAPALAPCV LNAVLITASL
AAVALGWPVP TTLALAVLVA GLGQWLLQQP FLRRQGFSWF GPASLRHPGV LRIGRLMLPT
VVGAAVYQLN IVLGTVLASF LSLGSISFLY YADRLVQFPL GVFGIAVSQA ALPSFSRLAA
DGAHEDLLQT LNKTLGLLLF ISLPSAAGLI ALSEPMVATL FGRGAFSAEA VQATAWALVG
YSTGLPAFCC VRSLVSTYYA LEDTKTPVKI ATLCLLLNGG LGLLLMQFWA HVGLALAVAL
ASWANVVLLL RGLRAHFNGP WMAVPGVVRM LGLSLLVGVG AWVTAGWGGW ALLGIPFWAA
VYLGAAGMLG MPETELFFDG TRQVLRRVGK R
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