| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0710 |
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| Symbol | |
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| ID | 8418523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 844517 |
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| End bp | 845824 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037274 |
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| Product | Na+/Ca+ antiporter, CaCA family |
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| Protein accession | YP_003197580 |
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| Protein GI | 258404838 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein
[TIGR00378] calcium/proton exchanger (cax) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.478041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTCTTT TAACTATCGG ATTGGTGGTC TTGCTTGTGG GTGCGGATCA ATTGGTCCGC
AGCGCTTCAC GGCTGTCCTT ACTGTTGGGG ATCTCTCCCC TGGTGGTGGG ATTGACCGTG
GTCGCCTTTG GGACCAGTGC GCCGGAATTG GCGGTCAGCA TGACCGCGGT CATCAGCGGC
ACGCCGGAGT TGGCCCTGGG CAACGTGTTC GGGAGCAATA TTTTCAATAC CCTGGTTATA
CTGGGGTTGG CCGCCGTCAT CCAGCCGTTG GTCGTGCAGC AACGGTTGAT CAGGCTGGAC
GTGCCAGTCA TGATTCTCGT CAGTGCTTTG GCGTGGCTGT GCGTGGCCAA TGGCAGGCTG
TCCATGCTCG AGGCCGGGAT ACTGCTGGCG ATTGGGGGCG GGTATCTGGC CTTTTTGCTT
TTGAAACAGG AGACCGGGCT CAAGGGAGGG GTCGAAGAGA TCGAGCGGCC TGAACCGCGA
CAATGGGTCT GGCGTGTGCC GCAGCTCTTT GCTGGGTTCA TTCTTCTTGT CCTGGGCAGC
AGTTGGACCG TGCAGGGGGC CACCTCCATC GCCGCACGGC TCGAGTTGGA TGCTATGGTT
GTTGGGTTGC TGATGGTCGC CGGAGCGACA TCGCTCCCGG AACTCGCGAC ATCCCTGGTC
GCCGCGGTGC GCGGCGAACG TGATATCGCC GTGGGCAACG TCGTGGGCAG CAACGTGCTC
AACCTTTTAC TGGTCCTTGG CGGGACAGGT CTGGTCAGTG GACACGGCCT GGAGATTCCC
CAGGCCGCCC TGCATTTCGA TATCCCCATC CTGGTCGGGG TGGCAGTGGC CTGTCTGCCC
ATCTTTTTCA GCGGGGGGAG CATTACCCGG CTGGAAGGAT TGTTTTTTCT TGTCTCCTAC
GCCATGTACA CCATCCTGCT GATCGGATTT CGCAAAGAAT GGTGGGCCCT GGCCAGTGAA
GATGTTGCTG GACTGTTTTT GCTGGCCTTC ACTGGCGGCG TCCTCGTGGT CTCGGTCCAC
CGCCTTGAGC GCCATATCGC CGGGACGCTG CATATGGTCG CTGCAGAGGC CGAGGCCTCC
TTGCGCGCCT CCTGGCGCCA GGTGCGCAAG CTGGTCGTTC TCGTGACCGG GGCGGCTGTG
GTTTTGGCCG GTATCGCCCT GCTGTTTCTT CCCGGTCCTG CCTTTATTGT GATCCCCTTG
GGCTTGGCCC TGCTGGGCAC GGAGTTTGTC TGGGCCCGCC GCTTGCTGCA CGGTATGCAG
AGCCAGATCC ACGCTACAGT CCGCCGGGCG AGAGGGCGGA AACGGTGA
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| Protein sequence | MLLLTIGLVV LLVGADQLVR SASRLSLLLG ISPLVVGLTV VAFGTSAPEL AVSMTAVISG
TPELALGNVF GSNIFNTLVI LGLAAVIQPL VVQQRLIRLD VPVMILVSAL AWLCVANGRL
SMLEAGILLA IGGGYLAFLL LKQETGLKGG VEEIERPEPR QWVWRVPQLF AGFILLVLGS
SWTVQGATSI AARLELDAMV VGLLMVAGAT SLPELATSLV AAVRGERDIA VGNVVGSNVL
NLLLVLGGTG LVSGHGLEIP QAALHFDIPI LVGVAVACLP IFFSGGSITR LEGLFFLVSY
AMYTILLIGF RKEWWALASE DVAGLFLLAF TGGVLVVSVH RLERHIAGTL HMVAAEAEAS
LRASWRQVRK LVVLVTGAAV VLAGIALLFL PGPAFIVIPL GLALLGTEFV WARRLLHGMQ
SQIHATVRRA RGRKR
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