Gene Dret_0703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0703 
Symbol 
ID8418516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp836513 
End bp836917 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content61% 
IMG OID645037267 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003197573 
Protein GI258404831 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.383651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.144185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTC CGTCTGCCCA CCCGCCTGCC TTGAAATCCT GCCAGGGCCG GACCTATTAT 
TGCTCCGTGG AACTCGCCCT GCAGATCATC GGAGGCAAGT GGAAACCGCT CGTGCTCTGG
CATCTCGGCT CAGAAACCGT TTTGCGCTTC AATCAGCTCC GGCGCACGAT CCCCAGCATC
ACCCAGAAGA TGCTCACCCA GCAATTGCGG GAATTGGAGT CCGACGGACT GGTTCAACGT
ACGGTCTACG CCGAGGTTCC GCCGCGTGTC GAATACGCCT TGACCGAGCT TGGCCAGAGC
GTCATGCCGG TCTTGCGGCA ATTGTGCCGC TGGGGCGGAG AATACGAAAA ACGGTTCTCG
GTCGAGAAGG AGGCCGCTCC GTCACCGCGC TCCGCGACCT CGTAA
 
Protein sequence
MSAPSAHPPA LKSCQGRTYY CSVELALQII GGKWKPLVLW HLGSETVLRF NQLRRTIPSI 
TQKMLTQQLR ELESDGLVQR TVYAEVPPRV EYALTELGQS VMPVLRQLCR WGGEYEKRFS
VEKEAAPSPR SATS