| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0690 |
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| Symbol | |
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| ID | 8418503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 819563 |
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| End bp | 823255 |
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| Gene Length | 3693 bp |
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| Protein Length | 1230 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037254 |
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| Product | pyruvate carboxylase |
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| Protein accession | YP_003197560 |
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| Protein GI | 258404818 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1038] Pyruvate carboxylase |
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| TIGRFAM ID | [TIGR01235] pyruvate carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.775311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.465507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGAAA AATCTTTTGA GCAGGTATTA GAAGAATTGC GCGGCCAGCC GATTCTGGTG
GCCAACCGCG GCATTCCGGC ACGCCGGATC GCCCGCTCGA TCCGGGAAGT CTTCAAGGGC
GTTCCGATCA TGACGGCCAC AGAGGTCGAC AAAACCGCCC CATTTACCAC CGGCGCCCAG
GAATTGCTCT TGCTGGGGTC AAGCCCGCAG GCCTATCTGG ATGTGGATTT GATTATCCGC
CGGGCCAAGG CGCGCGGGGT CAAAGCGATC CACCCCGGCT GGGGGTTCGC CTCTGAAGAT
GAGGCCTTCC CGGAAAAATG CCGAGCCGCT GGCCTGGTGT TTATCGGTCC GCCTTCCAGA
CCGATGCATA TCCTGGGCAA CAAGGTCCAG GTCCGCAATC TGGCCAAAGA GCACGGGGTC
CCTGTCGTTC CGGGGTCTGA CGGTGCGGTG AGCATTGACG AGGCCCGCCG GATTGCCGAG
GACATCGATT TTCCGATCAT GCTCAAGGCT GAAGGGGGCG GCGGAGGGCG CGGCATTTAC
GAAGTCTACC AGCAAAGCGA ACTCGAACGC GCCTTTGCCA AAGCCTCCTC CCTGGCCCAA
GCCTCCTTTG GCAACCCCCG CCTGTATGTC GAAAAGCTCC TGACCTCGAT CCGGCACATC
GAAATCCAGG TCATCGCCGA CCAGCACGGG AATGTCTTCG CCTTTGACGA ACGCGACTGC
ACCGTTCAGC GCAATCACCA GAAGCTCGTC GAGATCACGC CCTCGCCCTG GCCGGTGATG
ACTGAGGAGT TGCGCGAACG GCTCAAGGAG TACTCCCGTC GCCTGGTCAG CGCTGTGGGC
TACCATTCCC TGGCCACCGT CGAATTCCTG GTGGACATGG AGGGCAATCC CTACCTGATC
GAGGTCAATA CCCGGCTTCA GGTGGAGCAC GGCATCACCG AGTGCCGCTA TGGCATCGAC
TTGGTCGAGG AACAGATAGC GGTGGCTTTT GGCGCCAAAC TCCGTCTGGA CGATGCCAAG
CCTTGTCCCG GGAACCACGC CTTGCAGGTG CGCATCAACT GCGAAGACCC GCAGGACGGT
TTCGCGCCCA ATGCCGGGCG CATCACCCGC TACCTCTCTC CAGGCGGACA GGGGGTCCGT
GTGGATTCCT GTCTTGCCGC CGGGTATGAA TTCCCTTCCC AGTACGATTC GGCAGCCTCC
CTGCTCATCG CCTACGGCCG GGACTGGAGC AAGGTCCTCG GGGTCATGGA GCGGGCTCTG
AGCGAATATG TTATTTCCGG GGTCAAAACG ACCATTTCCT TTCACCAGCG GATTATTGCC
AATCCGCAAT TCCGGTCCGG CGATTACGAT ACGACCTTTG TGGGCAAGAC GCCGCAATTG
CTCGAATACG TCAGCAAGGA GGCGGAAGCG CAGCGTCTGG GCCGACTGGT TTGCGAAATT
TCGGCCTACG GCCACAATCC CTTTGTCCAA CTCGGGGAAT ACCGGGGCCG TTCGGACAAG
CGCCTCGGTG CCCTTGACGT GGTCCAGCCG GAGGTCGATT TCGACGCCAT CGAATCGCCG
TATCCCCGGG GAGACCGTCA GGCCTTGCTC GATTATGTCC GGGATACTGA GCATGTCCAT
TTCACGGACA CCACGACCAG GGACATCACC CAGTCCAACA GTGGCAACCG GTTCCGCCTG
GCCGAGGACC GGCTCATCGG CCCCTATCTG GACAATTGCG GATTCTTCTC CTTGGAAAAC
GGTGGCGGGG CCCACTTCCA CGTGGCCATG CTGGCGAACA TGACCTATCC CTTCACCGAA
GCCAGGGAAT GGAACGAGTT CGCTCCCAAG ACCCCGAAGC AGATCCTGAT CCGGTCGACC
AACGTTCTGG GCTACAAGCC CCAGCCCAAA AATCTGATGC AGCGCACCGG GGAGATGATC
TGCGAGCATT ACGATATCAT CCGCTGTTTT GATTTTCTGA ACCATATCGA GAATATGCGG
CCCTTTGCCG AAGTGGCGGC CAATACCCGG GGCAATGTTT TTGAACCAGC CTTGTCGTTG
TCCTGGACCA AGGGGTTTGA TGTCGACCAT TACATGCAGG CCACCGAGGC CGTGGTCCGG
CTCATGGCCG ATGTGACTGG CAAGGATCCC AGGCAGGCCA CGCGGGTCTT CTCCCTCGGA
CTCAAGGATA TGGCCGGGGT CTGCCCGCCG CGCTTTATCC GCGAACTGGT GCGGCGCATC
CGAAGCACCT ATCCCGAACT CGTGGTCCAC TACCACCGGC ACTACACCGA TGGATTGTTT
GTGCCGGCAG TCGGCGCTGC TGCCGAAGCC GGAGCCCATA TCGTGGATAC GGCCATTGGC
GCCACCGTGC GCTGGTACGG CCAGGGCGAG GTGCTTTCCA CGGCGGCTTA TATTGAGGAC
GAGATCGGTC GTGCGACCAA TCTGAACAAG GACATGATCC GCGATTGCAA TTTCGTCGCC
AAGCAGATCA TGCCCTATTA CGACCGGTAT ACCGCCCCCT ACTTCCAGGG GATCGACTAC
GATGTCGTGG AGCACGGTAT GCCCGGGGGC GCGACCTCCT CTTCCCAGGA AGGGGCCATG
AAGCAGGGGT ATATCCATCT TTTGCCCTAT ATGCTCCGCT TTTTGGCCGG GACCCGGAAG
ATTGTGCGTT ACCACGATGT GACCCCCGGC TCCCAGATTA CCTGGAACAC GGCGTTTCTG
GCCGTGACCG GGGCCTTTAA GCGCGACGGG GAAAAGGGGG TGCAGCGGCT GCTGCGCATC
CTGGAATCGG TGGTGACCAC CCCTGAGGAT TCCTTGTCTG AAGCCCTGCG CAAAGCGCGC
CTCGAACTCT ATCAGGACAG CAACGACGCC TTTCGGCAAT TGTTGCTGGG CCGTTACGGC
AAATTGCCAC TGGGGTTTCC CCCCGACTGG GTCTACGAAT CCGCCTTTGG CAAGGAATAC
ACCACAGCCC TGGAGAAGCG CACCGAGGAG TCGCCCTTGA CCTATTTGCA GGACATGGAC
CTCGACAAGG AGCGCGAGGC CCTGCACAAG GCCATCGGCC GCGAGCCAAG CCAGGAAGAG
GTGGTCATGT ATTGCAATCA CCCGGGCGAT GCCTTGAAAA CCATTGATTT CCGTCACCAA
TACGGCGACC CGAATCAATT GCCCCTGCAT GCCTGGTTTG AAGGGCTCCA GGACGGTGAG
GAGATCTATT TCAACGACCG CCACGGCAAA CCCCACCATC TGCTTGTCCG GGACGTTACC
GACCCCGATG AAAGCGGCGT GAGTGTTGTC CGCTATGCCC TGGATTCAGA ATCCTTCACC
CTTCCGGTGC AGGTTGCTGA ACCCTCCGGC AAAAGCAACA CTGATGTGGA GCGGGCTGAT
CCCAACGACC CCTATCAGGT CGCTGCCCCG AGCAACGGCG ATCTTTGGGT CATGCACGTC
CAACCTGGCG AACAGGTGCG CAAGGGTGAA GAGCTCTTCA ACATCTCGAT TATGAAGCAG
GAAAAGGCTG TTGTGGCACC CATTGACGGT ATCGTGGAGC GGGTGGTCAA GACAGCGGAC
TACATGGACG ACAAAAAGAT GGTACCGGTC AAGGAAGGGG AACTCCTGGT GGTTCTGGCT
CCGCCTAAGC GGACCTGCCT GGAATGCGGC GAGCCTTTCC CCAAAGAAAA CTGCACCTTC
TGCCCTTCGT GCGGAACGCG GTGCGCCAGC TAA
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| Protein sequence | MQEKSFEQVL EELRGQPILV ANRGIPARRI ARSIREVFKG VPIMTATEVD KTAPFTTGAQ
ELLLLGSSPQ AYLDVDLIIR RAKARGVKAI HPGWGFASED EAFPEKCRAA GLVFIGPPSR
PMHILGNKVQ VRNLAKEHGV PVVPGSDGAV SIDEARRIAE DIDFPIMLKA EGGGGGRGIY
EVYQQSELER AFAKASSLAQ ASFGNPRLYV EKLLTSIRHI EIQVIADQHG NVFAFDERDC
TVQRNHQKLV EITPSPWPVM TEELRERLKE YSRRLVSAVG YHSLATVEFL VDMEGNPYLI
EVNTRLQVEH GITECRYGID LVEEQIAVAF GAKLRLDDAK PCPGNHALQV RINCEDPQDG
FAPNAGRITR YLSPGGQGVR VDSCLAAGYE FPSQYDSAAS LLIAYGRDWS KVLGVMERAL
SEYVISGVKT TISFHQRIIA NPQFRSGDYD TTFVGKTPQL LEYVSKEAEA QRLGRLVCEI
SAYGHNPFVQ LGEYRGRSDK RLGALDVVQP EVDFDAIESP YPRGDRQALL DYVRDTEHVH
FTDTTTRDIT QSNSGNRFRL AEDRLIGPYL DNCGFFSLEN GGGAHFHVAM LANMTYPFTE
AREWNEFAPK TPKQILIRST NVLGYKPQPK NLMQRTGEMI CEHYDIIRCF DFLNHIENMR
PFAEVAANTR GNVFEPALSL SWTKGFDVDH YMQATEAVVR LMADVTGKDP RQATRVFSLG
LKDMAGVCPP RFIRELVRRI RSTYPELVVH YHRHYTDGLF VPAVGAAAEA GAHIVDTAIG
ATVRWYGQGE VLSTAAYIED EIGRATNLNK DMIRDCNFVA KQIMPYYDRY TAPYFQGIDY
DVVEHGMPGG ATSSSQEGAM KQGYIHLLPY MLRFLAGTRK IVRYHDVTPG SQITWNTAFL
AVTGAFKRDG EKGVQRLLRI LESVVTTPED SLSEALRKAR LELYQDSNDA FRQLLLGRYG
KLPLGFPPDW VYESAFGKEY TTALEKRTEE SPLTYLQDMD LDKEREALHK AIGREPSQEE
VVMYCNHPGD ALKTIDFRHQ YGDPNQLPLH AWFEGLQDGE EIYFNDRHGK PHHLLVRDVT
DPDESGVSVV RYALDSESFT LPVQVAEPSG KSNTDVERAD PNDPYQVAAP SNGDLWVMHV
QPGEQVRKGE ELFNISIMKQ EKAVVAPIDG IVERVVKTAD YMDDKKMVPV KEGELLVVLA
PPKRTCLECG EPFPKENCTF CPSCGTRCAS
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