| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0688 |
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| Symbol | |
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| ID | 8418501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 817321 |
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| End bp | 818256 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037252 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_003197558 |
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| Protein GI | 258404816 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.427677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.256859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGAAGCC TGACAATCGC CACACGGGGC AGTAAATTGG CGCTCTGGCA AGCCAATCAC
ATCAAGGGCC GCCTGGAAGA AAGATACCCC GGTATTGAAG TTCACCTCGA GGTTATCAAG
ACCCAGGGCG ACAAGATCCT GGACGTGCCG TTGGCCAAAA TCGGCGGCAA GGCCTTGTTC
GTCAAAGAGA TTGAAGAGGC CATGCTCGAT GGGCGGGCTG ATCTTGCCGT GCATTCCATG
AAGGATGTCC CAGCTGAATT GCCCGAGGGA TTGACCCTGG GAGTCATTCC CCAACGCGAG
GACTACACCG ACTGCCTTTT GAGCCAGCAC TACACGACTC TGGAAGAGAT ACCTGAGGGC
GCGACCATCG GGACCAGCAG TCTACGCCGC AAGACCCAAT TGCTGCGTCT GCGTCCGGAC
CTGGTGATCC AGGACCTGCG TGGCAATCTC GATACCCGCA TCCGTAAGCT GGAAGAGGGG
ATGTTTGACG CCATTGTCGT GGCCTCGGCC GGTTTGCGCC GGTTGCAGAC AGGGGCCAGG
TACATGACCG AACTGGCGCC GCCGCAATTC CTTCCCGCCG TGGGACAGGG GGCGCTGGGC
ATCGAATATC CTGAAGACCG CAAGGATCTC GAGGAAATGC TCGGGTTTCT GGACCACCCC
CCGACCCGTT TTTGCGTCTT GACCGAACGC GCCTTTCTCC ACCGCCTTGA AGGCGGTTGC
CAGGTACCCA TCGGGGGGCA CGCCGTCATG AGTGAATCGA ACAAGCTCCA CCTCGATTGT
TTTGTGGCCG ACCTGCACGG TCAGCAATGC CTGCGCCGGG AGGGCGAGGC CAAACCCAAA
GACGGCGTAG CCTTGGGGCA GCGATTGGCG GACGACATCC TGGCCTCCGG CGGAGCTGAG
ATTCTGCGGG AAATTTACGC CTGCGATGAC GAGTAG
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| Protein sequence | MRSLTIATRG SKLALWQANH IKGRLEERYP GIEVHLEVIK TQGDKILDVP LAKIGGKALF
VKEIEEAMLD GRADLAVHSM KDVPAELPEG LTLGVIPQRE DYTDCLLSQH YTTLEEIPEG
ATIGTSSLRR KTQLLRLRPD LVIQDLRGNL DTRIRKLEEG MFDAIVVASA GLRRLQTGAR
YMTELAPPQF LPAVGQGALG IEYPEDRKDL EEMLGFLDHP PTRFCVLTER AFLHRLEGGC
QVPIGGHAVM SESNKLHLDC FVADLHGQQC LRREGEAKPK DGVALGQRLA DDILASGGAE
ILREIYACDD E
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