| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0685 |
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| Symbol | |
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| ID | 8418498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 814394 |
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| End bp | 815743 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037249 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_003197555 |
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| Protein GI | 258404813 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0152054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.458275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGCTA TTCAGTCGTT TCTCGGGGCC ATCAGCGGTT TTGTCTGGGG GCCGTACATG
CTTATTCTTT TGGTCGGGAC TGGGATTTAT CTCACCTTTG GATCCCGGTT ACAGACCATT
CGAAAGGTCG GATACGGTTT TAAACTGCTG ATGCAGGGGA AAGACAAGGC CAAGCAGCGT
GGGGAAGGGG AGATCACGCC GTTTCAGGCC TTGATGACTT CGCTGTCGGC TACGATCGGA
ACCGGAAATA TTGCCGGTGT GGCCACGGCG ATTTTTCTTG GGGGGCCCGG CGCTGTTTTC
TGGATGTGGA TTACGGCCAT TTTCGGCACC GCCACCAAAT TCGGAGAGGC TGTTTTGGCG
GTCAAATACC GCGAAACCAT GCCTAACGGA TCCTACGTCG GTGGTCCCAT GTATTACATC
AAAAATGGCA TGGGGCCCAA GTGGCAATGG TTAGGCTTTT TGTTCGCCCT GTTTGCCGGC
ATCGCCGCTT TCGGCATCGG CAATACGGTC CAGTCCAACT CTGTGGCCCT GGCCGTGAAC
CAGTCTTTGT CCATCCCGAC CTGGCTGACA GGTGTGGTTC TGGCCGGTCT TACCTTTGCG
GTGGTTATCG GCGGGATTAA ACGGATCGCG AATGTGGCTG AGCGGATCGT GCCGTTGATG
GGCATTATTT ATGTTCTCGG TGCCCTGGGT GTGGTCTTTG CCAATTTTAC CGAGTTGCCG
TCGGCCCTGG GCATGATCTT TTCGGATGCC TTTTCCGGTA CTGCCGCGGC CGGTGGCTTT
GCCGGCGCCG CAGTGGCCCA GGCCATGCGC TTTGGTGTCG CCCGCGGGGT GTTTTCCAAT
GAAGCAGGCC TCGGGAGCGC GCCCATGGCC CACGCCGCCG CCAGGACCAC AGATCCTGTG
CGCCAGGGCA TTGTGGCCAT GCTCAGTCCG TTTATCGACA CCATCGTTGT GTGTACGCTG
ACAGCTCTGG TGATTATCAT GACCGGGGCT TGGCAAAGCG GCGAGACCGG AGCCGAGCTT
TCGGCGCTGG CCTTCAACCG TGGTCTGCCG GGGCCGGGCG ACTTTGTGGT CACCTTTGGT
CTGATCTTTT TCGCGTTTTC CACAATATTG TCCTGGTGTT ATTATGGCGA GGTCTGTGTC
GAGTACATTT TTGGCCTCAA AGGGGTCCAG CCCTACCGTT ATTTGTATGT CCTGCTGGTG
TTTATCGGGG CCGTGGCCAA TCTGGATCTG GTCTGGACCT TCTCCGATGT GATGAACGGG
CTTATGATTG TGCCCAACCT GATCGCCTTG TTGGTCCTCA GTCCGGTCAT CTTCAAATTG
TGTCAGCAGT ATTTTGCCAA CAATAAATAA
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| Protein sequence | MEAIQSFLGA ISGFVWGPYM LILLVGTGIY LTFGSRLQTI RKVGYGFKLL MQGKDKAKQR
GEGEITPFQA LMTSLSATIG TGNIAGVATA IFLGGPGAVF WMWITAIFGT ATKFGEAVLA
VKYRETMPNG SYVGGPMYYI KNGMGPKWQW LGFLFALFAG IAAFGIGNTV QSNSVALAVN
QSLSIPTWLT GVVLAGLTFA VVIGGIKRIA NVAERIVPLM GIIYVLGALG VVFANFTELP
SALGMIFSDA FSGTAAAGGF AGAAVAQAMR FGVARGVFSN EAGLGSAPMA HAAARTTDPV
RQGIVAMLSP FIDTIVVCTL TALVIIMTGA WQSGETGAEL SALAFNRGLP GPGDFVVTFG
LIFFAFSTIL SWCYYGEVCV EYIFGLKGVQ PYRYLYVLLV FIGAVANLDL VWTFSDVMNG
LMIVPNLIAL LVLSPVIFKL CQQYFANNK
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