| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0674 |
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| Symbol | |
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| ID | 8418486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 804294 |
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| End bp | 805361 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037237 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003197544 |
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| Protein GI | 258404802 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.811028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTATT CCTGCCAGGG GGGATTGGCC CTGTTTTGTT CCCCCACCGG TTCCGTCCTG
GAAGTCATCC GGGATGAAAC TGGCCTGATG GACCATCTCG GATCGCAACC GCTGCTCTCG
CGCATCATCT ATAAGGATGA CCGCCGTAAG CTGCTCAATT TTCTTCTTCG CGTCCGAAGC
TATGGCAGCG CTTTTGATTG GGAGATAGCC GTGCGCTGCC AGGAGCAGGC GGTGCCCTTC
TATTTCGCGG GAGTAGTGCA TGAAGAAAAA ATTCTCGTCG TCGCTTCTCA TTCGCAGGAC
GGGGTTTATT CCCTCTACGA AGAGCTCATG CTCATCAATA ATGAACAGGT CAATCAGCTC
CGCCATGTCC TTAAAGAAAA AGCCGAACGG CTGTATGACA CCGGTGACGA AGAGGACGGG
TTGTGGAGTG ATTTGACACA GATGAATAAT GAACTCATCA ATTTGCAGCG TGAACTGGCC
AAAAAGAATG CGGCGTTGGA AGCGGCCAAT ACACGCATCA ATGAGTTGTT GCGCACTGAC
CCGCTGACCG GTGTGGCCAA CCGTCGCCAT GTCGAGGACT TCCTTGGTCA GGCCGTGGCC
CGCAGCGAGC GGCATGGTGT GCCTTTGTGC GTGGTCATGT GTGACCTGGA CCGGTTCAAG
GCAGTCAACG ACACCTACGG CCACGCGGTT GGCGACCAGG CTCTGCAGGG ATTTGCCTCG
GTGTTACTGG AAAATTGCCG CACGGAAGAT CTGGTGGGGC GGTTTGGCGG CGAAGAATTT
CTGCTCGTGC TCCAGGATAC GACCTTAGAA GCGGGCGGCT GCCTGGCCGA CCGGATGCGG
CAGAAGGTTG CCACAGCTGT GCTGGTTGCT GAAGGGGTGC AGCAAACAGC AAGTTTCGGT
GTGGCCGCCT ACCGTGCAGG AGAAGGGTCT GAATCGGTAA TCCAACGCGC AGACAAAGCG
ATGTATGCGG CCAAGAACAA GGGCAGAGAC AGAGTGGTTC TGGAAAATGA GACCCAGCCT
GACTCCTCTC TGTCCCCATG CGCAGAGGAG CGTGGGAAGG GGGCTTGA
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| Protein sequence | MPYSCQGGLA LFCSPTGSVL EVIRDETGLM DHLGSQPLLS RIIYKDDRRK LLNFLLRVRS
YGSAFDWEIA VRCQEQAVPF YFAGVVHEEK ILVVASHSQD GVYSLYEELM LINNEQVNQL
RHVLKEKAER LYDTGDEEDG LWSDLTQMNN ELINLQRELA KKNAALEAAN TRINELLRTD
PLTGVANRRH VEDFLGQAVA RSERHGVPLC VVMCDLDRFK AVNDTYGHAV GDQALQGFAS
VLLENCRTED LVGRFGGEEF LLVLQDTTLE AGGCLADRMR QKVATAVLVA EGVQQTASFG
VAAYRAGEGS ESVIQRADKA MYAAKNKGRD RVVLENETQP DSSLSPCAEE RGKGA
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