Gene Dret_0671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0671 
Symbol 
ID8418483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp800028 
End bp801530 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content60% 
IMG OID645037234 
Productadenylate/guanylate cyclase with integral membrane sensor 
Protein accessionYP_003197541 
Protein GI258404799 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0415363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.502054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGC GTATCAAGGT CTTTGTCGGT ATCTTCTGCA TCGCTTTTCT CGCTTCCGGA 
GCCACCGGCT CGTATTTCTA TCTCCAGGCC AAAATGGCAT TGTATCAGGG TATCCGCCAA
CAATTGGAAG CCAGTGCCGC GAGCACGGCT GCTCTCATTG ACGGCGAAGC CCTGCAACAG
CTGCGATCTC CTGACGATGC CGGTTCTCCG GCCCACAGAA CCATCCAGGA GGTCCTGCAC
AGCGTCGCCC AGGCCACGCC GGAATATCTC TATGTCTACA CCATGCGCCT GGATGACGGC
GGCGTGGAGT TCGTCGTGGA TACCCCGCCC TCGGACGACA ACGGTGACGG CACCATCTCC
GAGGAAGAAA TGCCCGCCCC CATCGGCACG CCCTATGAAA GCGCCCCCCA AAGCCTGCGG
AGAGGCTTCA CCCAGGTCAG CAGCGACAGC GAACCCTATG TCGACCAATG GGGGCGGACC
ATGTCCGGAT ACGCCCCCGT CTACAACAGC CAGGGCGACA GCGTCGGGCT TTTGGGCATC
GACATGGATG TCAGCCGGAT CCACCGCAAA CTCTCGCTCA TTGTCCAGGG CGGCCTGATT
TCGCTCGGGA TGGCCGTCGC GTTGGCCATC GTGCTTGCCT ACTATTTCGC CCGGCAGACC
CTGGTCCCGG TCCGCCGCCT GCAAAATGCC ATGACCCGTG TGCAGGAAGG GGATTATGCG
GTGCACATGG ACACCGACCG CAAGGATGAG TTCGGGCAAT TGGCAAACCA TTTCAACACC
ATGGTCACGC AACTGCGCCA AAAAGCCTGG TTGGTCAACA ACATGGGCAA GGTCGTCAAC
AAGAATGTTG TCCAGCGCAT CCAGGACGAA TCCCTGGAAT TGGGCGGAGA AGTGCTGCAG
ACCACGGTCC TCTTCTGTGA CCTGCGCGGA TTCACTGCCT TGTCAGAAAA ATTGCCCCCC
AAGCTCCTGG TCCACCTGCT CAACGAGTAC TTCTCGGCCA TGGTCGAGGC TGTGGAGCGT
CACGGGGGCA TCGTGGACAA ATTCATCGGC GACGCGGTCA TGGCTGTCTT CGGCCACCCC
ACACCCTTGC CTCAGGAACA GGATGCTGCC CTGGCCGCTG CCCAGGACAT GCTCGCCGCC
TGCGACTCCC TCAATGTGAC CATGGGGGTG CACAAAGATA TTCTCCTTAT CAATTCCGTG
GGCATCCACA CCGGAATGGT CATGGCCGGC AATATCGGGA GTCCGGAACG CATGGAATTC
ACGGTCATGG GGGATGCGGT CAATGTCGCC GCCCGGTTGG AAAACCTGAC CCGGCAATTG
GGCACACGTC TGGCCGTATC CGGGGACGTG GTCGCCACCC TGCAGGACGG GTCTCCCCTG
GTATCCGCCG GAGAATGCGA TGTCTCCGGA AGAAAGGAGC CGGTCCAGGT GGCTATCCTG
TCCCAAGTCG AATCGAGTTC CCTGGAGCGG TCCCCGATCC GTACCGATTC CCAAGGGGAT
TAA
 
Protein sequence
MSMRIKVFVG IFCIAFLASG ATGSYFYLQA KMALYQGIRQ QLEASAASTA ALIDGEALQQ 
LRSPDDAGSP AHRTIQEVLH SVAQATPEYL YVYTMRLDDG GVEFVVDTPP SDDNGDGTIS
EEEMPAPIGT PYESAPQSLR RGFTQVSSDS EPYVDQWGRT MSGYAPVYNS QGDSVGLLGI
DMDVSRIHRK LSLIVQGGLI SLGMAVALAI VLAYYFARQT LVPVRRLQNA MTRVQEGDYA
VHMDTDRKDE FGQLANHFNT MVTQLRQKAW LVNNMGKVVN KNVVQRIQDE SLELGGEVLQ
TTVLFCDLRG FTALSEKLPP KLLVHLLNEY FSAMVEAVER HGGIVDKFIG DAVMAVFGHP
TPLPQEQDAA LAAAQDMLAA CDSLNVTMGV HKDILLINSV GIHTGMVMAG NIGSPERMEF
TVMGDAVNVA ARLENLTRQL GTRLAVSGDV VATLQDGSPL VSAGECDVSG RKEPVQVAIL
SQVESSSLER SPIRTDSQGD