Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0642 |
Symbol | |
ID | 8418454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 767464 |
End bp | 769014 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645037206 |
Product | transposase IS66 |
Protein accession | YP_003197513 |
Protein GI | 258404771 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.153379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0230063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACGA AAGACCTTCC CAACGACACA CAAGAGCTGA AAAAAATCAT TTCTGACTAT CAGTACCACG TATCGTATTT AAAAGAGAAA ATTGACCTTC TGCAAAAAGC GATATTTGGC ACGAAGTCTG AAAAAAGCTC GAATGCACAA TCTTTGGAAA ACCACCTGCC TTTGCCTGGT TTTGAGATGG CAGAGCCCGA ATCCAAAGAA CAGCACAGCG TTACCGTTCC CGAGCATACC CGCCAAAAAC GCGGCAGAAA GCCTCTTCCC CCTGATCTGC CTCGCGAGGA GATCGTCCAC GACATCTCTG AGGAAGACAA GGTCTGCGCT TGCGGTACCT CACTGACTTG TATCGGCCAG GAAGTCAGCG AAAAGCTGCA CTATGTGCCC TCACGCCTTT GTGTGCACAA GCATATCCGC CGCAAATACG CCTGTCGGGG CTGTGAGGGC GTCGAAAGCC AGCAGGGAGC TGTGGTCACC GCGCCCATGC CGGCCCAGCT GATCCCGCAG GGGATTGCCA CCCCCAGCTT GCTGGCGCAC ATCCTGGTGG CCAAGTTTGT GGACGCCTTG CCGTTTTATC GCCAGGAGAA ACAGTTTGCC AGACTGGGCG TCGATCTCTC CCGCTCCACC ATGGTGGCGT GGGCCATGTC TGCAGCCAGG GCCTGTGAGC CCTTGCTCGG CTTGTTTAAA AAAGATCTGC TGGCTGATCA CTTCCTGGGC ATCGACGAAA CCCCGGTGCA AGTACTCAAC GAATCGGGCA AAGCCAACAC CACCAAATCC TACATGTGGG TCTTTCTGGG CGGATCGGCT GAGCGCCCCA CCGTGTTGTA TCAATACCAT CCCAGCCGCA GCGGCAAGGC GCTGGACTTC CTCCAGAACT TTACTGGATA TATCCAAACC GATGGGTATG CCGCCTACGA AGCCCTGGGC GAACGGCCGG GGATCACCCA TGTGGGCTGC CTGGCCCATG TCCGTCGCAA ATTTATGGAT GTTATCAAGA TCTCCAAACG GGCAAAGGCC AAAGGCGGCG TTGCCCAGGA GGTCCTCGAT CGCATCGCCC AACTCTACAA CCTGGAGCAG ACGCTGGCCC AGCAAAAACT GGAACCGGGT CGGATCAAAG AGCAGCGGGA ACAATATGCT GTCCCCATAC TGGATGAAAT CAAATCAATC CTGGACCAAG GATCGCTGAG CACTCCTCCC AAAAGCCAGT TGGGCAAGGC CATCGCGTAT GCCCTGAACC AGTGGGACCG CGTGGTGCGT TATGTGGAAC ACGGTAGGAT CAGGCCGGAC AACAACCTTG TTGAAAATGC CATCCGACCC TTTGCCCTGG GCCGGAAGAA CTGGCTGTTC GCCGGCCATC CCAATGGCGC CCACGCCGGA GCCCTGTTTT TCTCCTTGAT GGAAACCGCC AAGCTAAACG GCCTGGAGCC CTATGCCTAT CTGTGCCATC TCTTTGAGCA CCTGCCCCGG GCTCAGGATG AGCAGGATGT TCAAGCACTC CTGCCCCAGC ACATCGATCC CGCCCTGATC CAAACGCCTT CCGCAGGCTA G
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Protein sequence | MNTKDLPNDT QELKKIISDY QYHVSYLKEK IDLLQKAIFG TKSEKSSNAQ SLENHLPLPG FEMAEPESKE QHSVTVPEHT RQKRGRKPLP PDLPREEIVH DISEEDKVCA CGTSLTCIGQ EVSEKLHYVP SRLCVHKHIR RKYACRGCEG VESQQGAVVT APMPAQLIPQ GIATPSLLAH ILVAKFVDAL PFYRQEKQFA RLGVDLSRST MVAWAMSAAR ACEPLLGLFK KDLLADHFLG IDETPVQVLN ESGKANTTKS YMWVFLGGSA ERPTVLYQYH PSRSGKALDF LQNFTGYIQT DGYAAYEALG ERPGITHVGC LAHVRRKFMD VIKISKRAKA KGGVAQEVLD RIAQLYNLEQ TLAQQKLEPG RIKEQREQYA VPILDEIKSI LDQGSLSTPP KSQLGKAIAY ALNQWDRVVR YVEHGRIRPD NNLVENAIRP FALGRKNWLF AGHPNGAHAG ALFFSLMETA KLNGLEPYAY LCHLFEHLPR AQDEQDVQAL LPQHIDPALI QTPSAG
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