| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0634 |
|---|
| Symbol | |
|---|
| ID | 8418446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 761168 |
|---|
| End bp | 761626 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 645037199 |
|---|
| Product | flagellar protein FliS |
|---|
| Protein accession | YP_003197506 |
|---|
| Protein GI | 258404764 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1516] Flagellin-specific chaperone FliS |
|---|
| TIGRFAM ID | [TIGR00208] flagellar biosynthetic protein FliS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00323334 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCAG TGAATCCCTA CCAGCAAAAT CAAGTGCATA CAGCACCCCG TGAAGATATC
CTGCTCCAAC TTTTTGAAGG GGCGATTATT CGCCTCAAAC AAGCCCAAGA TTACAAAATA
AAAAACCAGA TCGGAAAAGC CCGTGAGCAA CGAATAAAAG CGTTTGACAT TATAAGTTAT
CTGGACGCCA CCCTAGATGC GAATGCCGAT CAGGAACTGG TCGATTCCCT GCACAGTCTG
TATGATTTTA TGCTCCGGGA AATTACCCAG GCTTCGCTCA ATGACGATTT TGAACGCCTT
GATAATGTGG TGGATGTGCT CAGTACCCTT TTTGAGGGCT GGAAGGATGC TGTGGCTGAG
TACAAGAAGT CACAGCATCA GCACAAGCCG CTGGGTGGAC CGAGTTACGG GCAGGCGGAG
AATTATGGAG ATATGCGGAG CTACGAAGGC TCTCGGTGA
|
|---|
| Protein sequence | MQPVNPYQQN QVHTAPREDI LLQLFEGAII RLKQAQDYKI KNQIGKAREQ RIKAFDIISY
LDATLDANAD QELVDSLHSL YDFMLREITQ ASLNDDFERL DNVVDVLSTL FEGWKDAVAE
YKKSQHQHKP LGGPSYGQAE NYGDMRSYEG SR
|
|---|
| |