Gene Dret_0631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0631 
Symbol 
ID8418443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp758349 
End bp759194 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content46% 
IMG OID645037196 
Productflagellin domain protein 
Protein accessionYP_003197503 
Protein GI258404761 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000536021 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACTTT CGATCAACAC CAATATGGCG TCGCTTCAGT CGCAGATGTC TTTGGCAAAT 
AGCACTCAGG CGTTGGAGCA AAACCAACAA AGGTTGGCCA CTGGTCTGCG TATTAATTCT
GCAGCTGATG ATGCCGCCGG ACTGACAATC ACGGATGGAA TGACCTCCCA GATTCGGGGC
ATGAATCAAG CTGTTCGAAA TGCCAATGAT GGTATCTCAA TGGCCCAAAC TGCTGAAGGT
GGAGCTAAAG AGATTACCAA TATGCTTCAG CGCATGCGTG AGTTGGCAGT TCAGGCAGCA
AACGATACCA ATACTGATGC TGATAAAAAG GCATTGCAAC AAGAATTCAA TGAATTGACT
GCTGAGATTA CTCGTGTTGG TAATTCAACC CAGTTTAATA AGGAAAATCT TCTTACAGGT
TCTGCTGGGG CAAGTGTTAA TATTCAAGTA GGTCCAAATA ACACAAGTGA TGATACGATT
AATATTGATC TTAGCCAAGA TCTGCGTGCC GCAACAGGTG CTCTTGGTGT TAACGGCTTA
AATATCGGGA GTGGTTCGTC TTTAACTCAG ATACAAACTG CAATTTCAGA TATTGATGAC
GCTATCGGGA CAGTCGATGA GTTTCGCTCC GAGCTTGGTG CTACTCAAAA TCGACTTCAG
TCGAGTATTT CGAATCTCGA AAATGCTGCA CAAAATCTTA CTGAATCCCG CTCTCGGATT
ATGGATGCGG ATATCGCTAA AGAATCCGCG GAAATGACCC AGAATAATGT CCGCCAGCAG
GCCTCAGCCG CTGTGTTGGC GCAAGCGAAT CAGCAGCCGC AGCTTGCGTT GCAGTTGCTC
GGGTAA
 
Protein sequence
MALSINTNMA SLQSQMSLAN STQALEQNQQ RLATGLRINS AADDAAGLTI TDGMTSQIRG 
MNQAVRNAND GISMAQTAEG GAKEITNMLQ RMRELAVQAA NDTNTDADKK ALQQEFNELT
AEITRVGNST QFNKENLLTG SAGASVNIQV GPNNTSDDTI NIDLSQDLRA ATGALGVNGL
NIGSGSSLTQ IQTAISDIDD AIGTVDEFRS ELGATQNRLQ SSISNLENAA QNLTESRSRI
MDADIAKESA EMTQNNVRQQ ASAAVLAQAN QQPQLALQLL G