Gene Dret_0614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0614 
Symbol 
ID8418426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp736999 
End bp737997 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content51% 
IMG OID645037182 
ProductN-acetylneuraminic acid synthase domain protein 
Protein accessionYP_003197489 
Protein GI258404747 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2089] Sialic acid synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.984154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.288463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATGT CAGTACAATT CATCGCCGAA GTCTCCAGCA ACCATCATCA AAACCTGGAT 
CGCTGTTTTC AATTTATTGA TGAAGCGGCC CGTATTGGGT GTTCAGGGGT CAAATTTCAG
CTTTTCAAGG TGGACGAACT CTTTGCACCA GAGGTATTTA AAGCAAAGCC CGATGTAGCC
AAACGCAGAC AATGGGAGCT ACCTGTAGCC TTTTTGCCTG AATTGGCCAC ACGCTGTCAT
GATAACAAAA TCTCTTTTTC CTGCACTCCT TTTTACCTGC AGGCCGTACA AGAGCTGTCT
CCCTATGTGG ATTTCTACAA AATAGCCTCG TATGAATTAT TGTGGGATGA TTTGCTCAAG
GCCTGCGCTC AAACGGGCAA ACCGCTTGTC CTCTCTACTG GCATGGCCAC CATGCAGGAA
ATCGAACACG CCGTGAATGT CATTCTGGAT TCTACACCTC AGACTGCGGA ACCAGGACAG
CGGACCCCGG ACCACGGACT TCGGACTACA GACCTCCCCC CCTTGACCCT GCTTCACTGC
GTATCCGGCT ATCCTGCACC TCCGAACCAA TGCAACCTGG CTGCCATTGA AACCATAAGA
AACGCCTATG CGCAGCTCTC TGAACCCTGT CCTCGAACCC CGGACCACGG ACCGCGGACA
CCGGACATCG GTGCACCGGC CTCGATCCAG GTCGGCTGGT CAGACCACAG TGTTTCGCCG
GGCGTCATAC ACCGAGCCGT ACACCGATGG GGAGCGAAGA TGATCGAATT TCATTTGGAT
CTGGAAGGCG AAGGGGAGGA ATACAGCGCT GGGCATTGCT GGCTGCCTGA TGAGATAAAG
CCTGTGATTG ATACAGTGCA AAAAGGTTTT CAAGCTGATG GCAATGGCCG AAAAGAACCA
ATGGCAAGTG AAGCAGATGA TCGAAACTGG CGGGCAGATC CGGAAGATGG ATTGAGGCCC
CTGAAGAAAT TCAGAAATGA TATAGAGATA GATTTATGA
 
Protein sequence
MLMSVQFIAE VSSNHHQNLD RCFQFIDEAA RIGCSGVKFQ LFKVDELFAP EVFKAKPDVA 
KRRQWELPVA FLPELATRCH DNKISFSCTP FYLQAVQELS PYVDFYKIAS YELLWDDLLK
ACAQTGKPLV LSTGMATMQE IEHAVNVILD STPQTAEPGQ RTPDHGLRTT DLPPLTLLHC
VSGYPAPPNQ CNLAAIETIR NAYAQLSEPC PRTPDHGPRT PDIGAPASIQ VGWSDHSVSP
GVIHRAVHRW GAKMIEFHLD LEGEGEEYSA GHCWLPDEIK PVIDTVQKGF QADGNGRKEP
MASEADDRNW RADPEDGLRP LKKFRNDIEI DL