| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0610 |
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| Symbol | |
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| ID | 8418422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 731234 |
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| End bp | 732451 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645037178 |
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| Product | UDP-4-keto-6-deoxy-N-acetylglucosamine4- aminotra nsferase |
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| Protein accession | YP_003197485 |
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| Protein GI | 258404743 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | [TIGR03588] UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.71949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCTT ACGGACGTCA GGAAATTACA GAAGCGGACA TTGAAGCTGT TGTCGAGGTT
TTGCGTTCGG ATTTGATCAC CCAAGGCTCT AAGGTTCCTG AGTTCGAGCG CGCTGTGACG
CAACAGGTGA GTGCAAAACA CGCCGTGGCC ACCAATAGCG CCACTTCCGC GCTGCATCTG
GCCTGCCGTA CACTTGGGGT CGGCCCGGGC GATCGGGTCT GGACTTCGCC TATCACCTTT
GTAGCCTCGG CTAATTGCGC TTTATATTGT GGCGCCCAGG TCGATTTTGT GGATATCGAC
CCCAATACCT ATAATATGAG CGTCCAGGCC TTGGAAGCCA AGCTGGATGC GGCAGAACGT
ACCGGGACCC TGCCCAAGGT GGTGATCCCG GTGCATATGT GCGGGCAATC CTGCGAGATG
CAGGAGATTG GAGAATTGGC TTGGCGGTAC GGCTTTTTTG TGCTCGAAGA CGCTTCTCAC
GCCATAGGCG GATATTATCA GCAGAAGCCT GTCGGAAATT GCCACTACAG TGATATTACG
GTCTTCAGTT TCCATCCGGT AAAAATCATC ACCACCGCAG AGGGCGGCAT GGCGGTTACC
AATAACCCGG GCCTAGCCCA ACAGATGGAA TTACTCCGCA GTCATGGCAT TACTCGAGAC
CCAAACCTTT TTGCTGACGT CCAATATTCG ACTTCGAAAA CCGTACCCCG GATTCCGGAC
CACGGACCTT GGTACTACCA GCAAATCGAT TTGGGGTACA ACTACCGCAT GACCGACATC
CAGGCCGCTT TGGGCCTCAA GCAACTGGAG CGCCTGAAAA CCTACGTAAC CAAGCGCCGG
AAATTGGCTT ACCGCTATGA CGAGCTGCTG GCCGATCTGC CCTTTCATAC GCCCTGGCAG
AATCCCGATA CCGAATCTGC TTGGCATATC TATATAATCC GCTTCAATCT TGAGGAGATT
GAACCGAACC GTAGAAAAGT TTTCGACTTT TTGCGCCAAC AGGGCATTGG CGTAAACGTG
CATTATATCC CGGTCCATAC CCAGCCTTAT TACCGCAAAA TAGGTTTTGA CTGGGGAATG
TTTCCTTCGG CTGAGAAATA TTACTGGGAG GCAATAACCT TACCTTTGTT TCCGACAATG
ACCAAGGAAA CACAAAATCA AGTCGTGAAT GCTTTAAAAA AAATTGCTCA CAAAATAGAT
AGAATGGCAC ATAAATAA
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| Protein sequence | MIPYGRQEIT EADIEAVVEV LRSDLITQGS KVPEFERAVT QQVSAKHAVA TNSATSALHL
ACRTLGVGPG DRVWTSPITF VASANCALYC GAQVDFVDID PNTYNMSVQA LEAKLDAAER
TGTLPKVVIP VHMCGQSCEM QEIGELAWRY GFFVLEDASH AIGGYYQQKP VGNCHYSDIT
VFSFHPVKII TTAEGGMAVT NNPGLAQQME LLRSHGITRD PNLFADVQYS TSKTVPRIPD
HGPWYYQQID LGYNYRMTDI QAALGLKQLE RLKTYVTKRR KLAYRYDELL ADLPFHTPWQ
NPDTESAWHI YIIRFNLEEI EPNRRKVFDF LRQQGIGVNV HYIPVHTQPY YRKIGFDWGM
FPSAEKYYWE AITLPLFPTM TKETQNQVVN ALKKIAHKID RMAHK
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