| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0603 |
|---|
| Symbol | |
|---|
| ID | 8418415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 724394 |
|---|
| End bp | 725272 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 645037171 |
|---|
| Product | flagellar hook-associated protein 3 |
|---|
| Protein accession | YP_003197478 |
|---|
| Protein GI | 258404736 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | [TIGR02550] flagellar hook-associated protein 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.891148 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTGA CCCTAGCCAG TTCCTTTCAG TTCATGCAAA CTGAAATCGG GCGGATCAAC
GAAAAGACGG CAGATCTGCA AAAGCAGGCA GCCACGGGCA AGAAAATCAA TGAGGTTTCG
GATGATCCCA CCGCAGTCCG CCCAATTCTC AATTATCGGA CCCAGATTGA AAGCAGTGAC
CGTTATACAA GAAATATGGA TGCGGCCAAA ACCGGATTGA AGAACTACGA TTACCAATTG
GGAAGGGCCT TTGATTTGCT GGTGCAGGCC AAAGAGCAAA CTGTGGCCGC AGGGAACGGG
GCATTGCGTG ATGAAGATAT GGCCACTATG GGCAAGATTG TGGAGGGGCT AAGGGAGGAA
CTGCTCGGCG TTGCCAATTC CCAGAGTGAC GGGCGGTACA TTTTTGCCGG GTATGAAGAA
GACACCAAGC CGTTTGCGGA TGATGGAACG TTTAACGGCG ATGACAATAC ACGCACACTT
GAGATCGCTC CCGGGGAAGA AGTCGACATT TCCGTTTCAG GAAAAGAGGT GTTCGCTTCT
ACAACTCCAG ACAATATTTT CGAAACGTTG CAGAATATTT CGACTGCAAT GAAGGATCCT
GCGATAGAGA TAGATTCAAA TGATGTTGAA TCTCTCCAGG AAGTTATGGA TACCGTGAGT
TCGACGCGGG CAGATGTGGG GACCAGAATC AACCGCCTCG AGTCCGCGGT GTCCTATCGG
GAGAAAGCCG TATTGGATAT GAAGGAATTT TTATCCGACT ACGAAGACGC GGACATCGTT
GAGGTTTCCT CACAATTGAT GCAGCAAGAG ACCTCTTTGA AGGCCGCCTT GGCCGTGACC
ACGAAAATCG GGCAATTGTC GTTGCTTGAC TATATGTAG
|
|---|
| Protein sequence | MRVTLASSFQ FMQTEIGRIN EKTADLQKQA ATGKKINEVS DDPTAVRPIL NYRTQIESSD
RYTRNMDAAK TGLKNYDYQL GRAFDLLVQA KEQTVAAGNG ALRDEDMATM GKIVEGLREE
LLGVANSQSD GRYIFAGYEE DTKPFADDGT FNGDDNTRTL EIAPGEEVDI SVSGKEVFAS
TTPDNIFETL QNISTAMKDP AIEIDSNDVE SLQEVMDTVS STRADVGTRI NRLESAVSYR
EKAVLDMKEF LSDYEDADIV EVSSQLMQQE TSLKAALAVT TKIGQLSLLD YM
|
|---|
| |