Gene Dret_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0596 
Symbol 
ID8418408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp717774 
End bp718463 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content50% 
IMG OID645037164 
Productflagellar L-ring protein 
Protein accessionYP_003197471 
Protein GI258404729 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAAT ATATTATAGT CTTTTGTGTG TTCGCTTTGG CATGTGGGTG CGCACCCAAG 
CACGAGCCGC AATGGGGGCC GGAGGCCAAT GCACCCCAAA AAGTCGTGCC CCAAAAGCCG
CAACGTGCCA GTCAGGGTTC ATTGTGGAAT ACAGGTGAGG CCAACCTCTT TTCGGACAAT
AAGGCGCAAG CTCCCGGCGA TATCGTTACC GTGTCTATCT CTGAACAGGC GCAGGCCAGC
AAAGACGCCA CCACTGATAC TGGACGCACA TCGAGTGTCG ATGCTGGTAT TAACAACTTG
TTTGGGATCC CCAATTCGCA AGCTCTGTTG AGCAATCCCA ATGTGGATTT GAAAAATTTG
GTCGGTGCCA ATTTCAACAA TTCTTTTGTC GGAAGCGGCG AAACTAGCCG GAATGCGAAT
TTATCGGCCA CGATCGCCAC CCAGGTTATT GAACAATTGC CGAACGGCAA TTTGCGAATC
TTCGGTCGTA AGCGGGTCAT GGTCAATAAC GAAGAAGAAT TTATCGGTTT GTCCGGAATT
GTTCGCCCCG AGGATATCAG TGCTCAGAAT GTGGTCGATT CAAGTTATGT GCTGGACGCT
GAGATCACTT ATACTGGTCG AGGCGCTATC AGCGACAAAC AAAAGCCCGG CTGGCTGATG
CGGCTGATTG ACAATGTCTG GCCGTTTTAG
 
Protein sequence
MYKYIIVFCV FALACGCAPK HEPQWGPEAN APQKVVPQKP QRASQGSLWN TGEANLFSDN 
KAQAPGDIVT VSISEQAQAS KDATTDTGRT SSVDAGINNL FGIPNSQALL SNPNVDLKNL
VGANFNNSFV GSGETSRNAN LSATIATQVI EQLPNGNLRI FGRKRVMVNN EEEFIGLSGI
VRPEDISAQN VVDSSYVLDA EITYTGRGAI SDKQKPGWLM RLIDNVWPF