Gene Dret_0594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0594 
Symbol 
ID8418406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp716001 
End bp716789 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content53% 
IMG OID645037162 
Productflagellar basal-body rod protein FlgG 
Protein accessionYP_003197469 
Protein GI258404727 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01396] flagellar basal-body rod protein FlgB
[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CTTTGTCCAC AGCCGCCACC GGCATGGAAG CCCAGCAGAC CATTGTCGAC 
GTCATCGCTA ATAACCTGGC CAACGTGAAC ACTACAGGTT TCAAGAAAAG CCGGGTCGAT
TTCCAGGATC TTCTCTATCA GGATGCCAGG AATGTTGGTA GTGCAGTGAC TCAAGAAAAC
GATGTGCCCA CCGGGACGCA GATCGGACAC GGGGTGCGTA CGGCAGCTGT TTATAAGATC
AACACTATCG GTGACATCAA CCGTACGGGC AATGAATTGG ATTTGGCCAT TGAAGGCGAT
GGATTTTTTC AGGTTACCTT ACCAGATGGG GAAACAGCCT ACACCAGGGC CGGAGCGTTG
AAGAAAGATG GAGACGGCCG AGTGGTGACC TCTGACGGAT ATCCCCTGGA GCCGGAGATC
GTCATCCCGG AAAATGCCAC TGATGTAGTT ATCGGTAAGG ATGGCACGGT GCAGGCCTAT
TTAGAGGGCG AAGCGGCCAC GCCAAGTGAT CTGGGTACGA TAGAGTTGGC CCGTTTCAGC
AACCCGGCCG GACTGAAAAA TATCGGTAAC AACCTCCACT TGGAGACGCA GTCCTCCGGA
GCGCCTATCG TTGATTTGCC CGGTGAAGAC GGACTTGGAG CGTTGGCGCA AAATTTTCTG
GAGGACTCTA ATGTGAGCAC CATGCAGGAA ATGGTGAATA TGATCTCAGC CCAACGGGCG
TACGAGATTA ATTCCAAAGC AGTCAAAACA GCTGATGAAA TGCTGCAGAT GACCAACCAA
CTCGCCTAA
 
Protein sequence
MTTALSTAAT GMEAQQTIVD VIANNLANVN TTGFKKSRVD FQDLLYQDAR NVGSAVTQEN 
DVPTGTQIGH GVRTAAVYKI NTIGDINRTG NELDLAIEGD GFFQVTLPDG ETAYTRAGAL
KKDGDGRVVT SDGYPLEPEI VIPENATDVV IGKDGTVQAY LEGEAATPSD LGTIELARFS
NPAGLKNIGN NLHLETQSSG APIVDLPGED GLGALAQNFL EDSNVSTMQE MVNMISAQRA
YEINSKAVKT ADEMLQMTNQ LA