| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0593 |
|---|
| Symbol | |
|---|
| ID | 8418405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 715215 |
|---|
| End bp | 715946 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645037161 |
|---|
| Product | fagellar hook-basal body protein |
|---|
| Protein accession | YP_003197468 |
|---|
| Protein GI | 258404726 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG4786] Flagellar basal body rod protein |
|---|
| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATTT TTTCCGGACT TGCCGCCCCG TTGTCTGGGG CCGCTTTAGA AAGAACCCGG
CTGCAGGTTT TGAGCAACAA TCTGGCCAAT ATCGATAATG CCGGATTTAA GCAGGACCGG
CTGCTGTTTG AAACGCAATT GGACAATGCC CAGGCTGGCA GGACGGGTGA AGGGACCAGC
CGGCTCCAGA TGACGAGCAC GCACACCGAC TTTTCCCAGG GGGGGCTGCA GCACACGGGA
CGCCCGCTGG ATCTGGCCAT CAAAGGCGGG GGGTTTTTCA AGGTCGCTAC TGATGATGGC
TTTGCCTATA CCCGTCACGG CAGTTTTGTG CTCCAGCCAG ACGGTGCCTT GGTCACTCCC
ACTGGGGAGC AAGTGGTTGG GGAGACCGGT CCGGTCAATC TCACGGACAG CAATGTCCGG
ATCAGTGAAG AAGGCTCTGT TTTCGGGGAA AACGGTGTGG AGCAGGGGCA GCTGGACTTG
TACACCGTTG ACGATCTCCA GCAATTGGAA AAACAAGGGG CGAATCTCTG GCGCCGCCCG
GAGGGTGTTT CGGAAAGAGT CGTCGCTGAG AGTACCTTGC ACCAGGGCCA GCTTGAGTCT
TCCAACGTAA GTGCCATTGA AATGACAACG GAGCTTATTC AAGCTGAGCG AGGATTTCAG
TCCTTCCAGA AAGCTATAAA AGCCTACGAT ACCGTTGCCC AGAAAACGAA CACAGTCGGC
CGGATCGGGT AA
|
|---|
| Protein sequence | MPIFSGLAAP LSGAALERTR LQVLSNNLAN IDNAGFKQDR LLFETQLDNA QAGRTGEGTS
RLQMTSTHTD FSQGGLQHTG RPLDLAIKGG GFFKVATDDG FAYTRHGSFV LQPDGALVTP
TGEQVVGETG PVNLTDSNVR ISEEGSVFGE NGVEQGQLDL YTVDDLQQLE KQGANLWRRP
EGVSERVVAE STLHQGQLES SNVSAIEMTT ELIQAERGFQ SFQKAIKAYD TVAQKTNTVG
RIG
|
|---|
| |