Gene Dret_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0579 
Symbol 
ID8418391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp703470 
End bp704216 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content53% 
IMG OID645037147 
ProductOmpA/MotB domain protein 
Protein accessionYP_003197454 
Protein GI258404712 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGAA AAAAGAAAAA AAACGGCGGA GGCGGCGGAA GTCCGGCCTG GATGGTCACC 
TACAGTGATA TGGTGACGCT GTTGCTGACG TTTTTTGTTC TTTTGCTCTC CATGGCGGAT
ATCAACCAGA TTAAGTTTAC CAAGGCCATC GGCTCTCTCC GAGGAGCCCT CGGGGTTCTG
GACAGCAAGG AGTATGAAGA CGTGCTGCCG CTGGACCTCA TGGCTCAGCA AAATAATCTG
AACGAGTCCT TGCAACGCGT GTATCAAAAT ATCAAAAACC GTATCGACAA CTTAGAAGTC
AACGAAAACA TCAAGTTGGT TAAAGACCGT GGAGCGGTGG TATTGCGTTT GAATGACTCG
TTACTTTTCG ACTCCGGGGA GACTGCCCTG AAGCCGCGCG CCGCTCCCTT GCTTCGCGAG
GTTGCTCAAT TGGTGCGTCC CCTGCATCTT GACATGCGCG TAGAGGGACA CACCGATAAT
GTCCCCGTTT CTCGGCCCGG GATCTCCAAT TGGGACATTT CCATTGAACG GGCGGTCTCT
GTGGTCAAAT TCCTCACCAG CCGTGATTTA CTGCCCCCCA GTCGACTTTC CGCAGCCGGG
TACGGAGACC AGCGTCCTCT CGTGCGCAAT GATTCTCCTG AGAACCGGGC TAAGAATCGG
CGGGTGGATT TTTATCTGGA GCAGGACGAA CATTATCGGG AGCAACTGCC GTATCTGATC
GATTCCCGCG AACAATACCC CTTTTAG
 
Protein sequence
MARKKKKNGG GGGSPAWMVT YSDMVTLLLT FFVLLLSMAD INQIKFTKAI GSLRGALGVL 
DSKEYEDVLP LDLMAQQNNL NESLQRVYQN IKNRIDNLEV NENIKLVKDR GAVVLRLNDS
LLFDSGETAL KPRAAPLLRE VAQLVRPLHL DMRVEGHTDN VPVSRPGISN WDISIERAVS
VVKFLTSRDL LPPSRLSAAG YGDQRPLVRN DSPENRAKNR RVDFYLEQDE HYREQLPYLI
DSREQYPF