Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0579 |
Symbol | |
ID | 8418391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 703470 |
End bp | 704216 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 645037147 |
Product | OmpA/MotB domain protein |
Protein accession | YP_003197454 |
Protein GI | 258404712 |
COG category | [N] Cell motility |
COG ID | [COG1360] Flagellar motor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGAA AAAAGAAAAA AAACGGCGGA GGCGGCGGAA GTCCGGCCTG GATGGTCACC TACAGTGATA TGGTGACGCT GTTGCTGACG TTTTTTGTTC TTTTGCTCTC CATGGCGGAT ATCAACCAGA TTAAGTTTAC CAAGGCCATC GGCTCTCTCC GAGGAGCCCT CGGGGTTCTG GACAGCAAGG AGTATGAAGA CGTGCTGCCG CTGGACCTCA TGGCTCAGCA AAATAATCTG AACGAGTCCT TGCAACGCGT GTATCAAAAT ATCAAAAACC GTATCGACAA CTTAGAAGTC AACGAAAACA TCAAGTTGGT TAAAGACCGT GGAGCGGTGG TATTGCGTTT GAATGACTCG TTACTTTTCG ACTCCGGGGA GACTGCCCTG AAGCCGCGCG CCGCTCCCTT GCTTCGCGAG GTTGCTCAAT TGGTGCGTCC CCTGCATCTT GACATGCGCG TAGAGGGACA CACCGATAAT GTCCCCGTTT CTCGGCCCGG GATCTCCAAT TGGGACATTT CCATTGAACG GGCGGTCTCT GTGGTCAAAT TCCTCACCAG CCGTGATTTA CTGCCCCCCA GTCGACTTTC CGCAGCCGGG TACGGAGACC AGCGTCCTCT CGTGCGCAAT GATTCTCCTG AGAACCGGGC TAAGAATCGG CGGGTGGATT TTTATCTGGA GCAGGACGAA CATTATCGGG AGCAACTGCC GTATCTGATC GATTCCCGCG AACAATACCC CTTTTAG
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Protein sequence | MARKKKKNGG GGGSPAWMVT YSDMVTLLLT FFVLLLSMAD INQIKFTKAI GSLRGALGVL DSKEYEDVLP LDLMAQQNNL NESLQRVYQN IKNRIDNLEV NENIKLVKDR GAVVLRLNDS LLFDSGETAL KPRAAPLLRE VAQLVRPLHL DMRVEGHTDN VPVSRPGISN WDISIERAVS VVKFLTSRDL LPPSRLSAAG YGDQRPLVRN DSPENRAKNR RVDFYLEQDE HYREQLPYLI DSREQYPF
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