| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0568 |
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| Symbol | |
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| ID | 8418380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 689958 |
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| End bp | 691427 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645037136 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003197443 |
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| Protein GI | 258404701 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATAC CCTCCTCCCA GCACACTCTA ATCATTACCG ACAACCACGC CGAAGGGGAT
CGGCTCAAAG AAGTATTGCG TCAGCTCTTA CCCGGAACAA TCACCATAAT GCCTCTATCC
ACGCCGCACT ACAGGGTGTT GCGCGAACAA AATCCAGACT TGCTGCTTGT CGCCCTCCAG
CAGGAAAACC CCTCCGGCTT AAGACATCTG CATCGCTTCC ACACGGAAAA AGAGAATAGC
CTGTCTATTG CCATCGTGCC TGAAGGAGAT CGTGAACTAA CGATTGAAGC CATGCATTCC
GGGGCTCAGG CCCATATAGC TTCGCCTCTG CATCCGGAAG AGGTCGAGCT CGTCGTTTCT
CGAGTAATGC CCCGCACTCA TCTCGTCAGC AAATCAGAAA TACCGGCCCC AAAGCTCCGA
GAAAGTGATG GTTTCCACGG CATAGTCGGC AACACCACCG TCATGCGTGA ACTTTTTGAC
CTCATCGATC GCATCGGCGA GGAAGGGGAG AGCACGATCC TGCTGCAAGG GGAAAGTGGG
GTCGGTAAAG AATTGGTCGC TCAGGCGCTG CACGCCTGCA GTCCACGCGC CGGGCACAAT
TTTGTCCCCG TCAATTGCGC GGCCATTCCG GACAGCCTTC TGGAAAGCGA ACTCTTCGGC
TATGAGAAAG GCGCTTTCAC TGGCGCGACC CAGGCGAAGA AAGGACGCTT CCAACACGCA
AACGGCGGGA CTCTGTTTCT CGATGAAATC GGAGAAATGC GGCCGGAGTT GCAGGCCAAG
CTTCTGCGGG TCCTGCAGGA AAAAGAATTC GAACCTGTCG GCGGCATGAA GCCGGTCCAG
GCTGATGTGC GCGTCATTGC CGCCACGAAT ATCAACCTTG AACTGGCAGT CAACGAAGGC
CGGTTCCGCA CCGATCTCTA CTACCGGCTC AATGTGGTAC CCTTAGAAAT ACCGCCGCTC
AGGGATCGGG TTGAAGACAT ACCGCTTCTG CTCGACAAAT TCACCCGGCT GTTCAACAGG
GGCAAGCAAT CACAACCGAA GCGGTTTTCG GCCAATGCGC TCAAGGCGCT TCAGGAGTAT
CCATGGCCGG GTAATGTCCG GGAACTCAAA AATATCGTCC AGCGCTTGTG TGTCCTGCAC
CGCAAAGCAG TGGTCAGGGT CCAGGACCTC CCGCCCCAAA TCGTCTCCGA TCCGGAACTG
CTTCATACCC CCGAGGAGGA GGAGGAAGAG GCCCTTTCCG CGGCTGTGCA AGATCTTCCG
GACATGCCGG ATATGGAAGA GGAAACCGAT TTCAATACCC GGGTCAGCGA ATTTGAAGAC
CGCCTTATCC TGCAAGCGCT GATCGCCACC AATGGGAACA AAAAACAAGC AGCGGAAAAA
TTGAATCTCA AACGCACGAC CCTTCTTGAA AAAATCAAGA AGAAACAGCT TGATAAAGTC
TTCAACTCCC TGCAGAAAAA GCAGGCCTGA
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| Protein sequence | MNIPSSQHTL IITDNHAEGD RLKEVLRQLL PGTITIMPLS TPHYRVLREQ NPDLLLVALQ
QENPSGLRHL HRFHTEKENS LSIAIVPEGD RELTIEAMHS GAQAHIASPL HPEEVELVVS
RVMPRTHLVS KSEIPAPKLR ESDGFHGIVG NTTVMRELFD LIDRIGEEGE STILLQGESG
VGKELVAQAL HACSPRAGHN FVPVNCAAIP DSLLESELFG YEKGAFTGAT QAKKGRFQHA
NGGTLFLDEI GEMRPELQAK LLRVLQEKEF EPVGGMKPVQ ADVRVIAATN INLELAVNEG
RFRTDLYYRL NVVPLEIPPL RDRVEDIPLL LDKFTRLFNR GKQSQPKRFS ANALKALQEY
PWPGNVRELK NIVQRLCVLH RKAVVRVQDL PPQIVSDPEL LHTPEEEEEE ALSAAVQDLP
DMPDMEEETD FNTRVSEFED RLILQALIAT NGNKKQAAEK LNLKRTTLLE KIKKKQLDKV
FNSLQKKQA
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