| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0545 |
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| Symbol | |
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| ID | 8418355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 653959 |
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| End bp | 656049 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645037111 |
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| Product | succinyl-CoA synthetase, alpha subunit |
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| Protein accession | YP_003197420 |
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| Protein GI | 258404678 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit
[TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGCA ACGAACACCA AAGCAAGTCC TTGTTCAAGA GCTGCGGCAT TCCGGTGCCA
CAGGGGGATC TGGTCACCCC GGAAATGGCT GCCGTCTACC GCCCCGATTT TGCACCGCCG
TTTATGCTCA AGGCCCAGGT CCTGCGCGGG GGGCGGGGAA AAGCTGGGGG GATCCGCAAA
GTCACGGCTC TGCAGGACTT GCCCGGGACG CTTAAAGAAA TCTTCGACAT GCGAATCGGC
GACGAGGCGG TGCCGCTGGT GCGCGTTGAA CCCGCTGCCG GTATCGCCAG GGAATTCTAT
CTCTCCATCA GCATCCAACG CGCTCTTGCC GCGCCTGTGT TGACCGTGGG GCGTGAAGGG
GGCGTCGACA TAGAAGCCAG CGGAGCGGAC AATCTTCTCA TTCAACCCCT GGACCCCTGC
CTGGGGCTCC GGGCCCACCA TGTCCGCAGC GCCTTCTTCC ATCTGGGGGT CGACAACGAT
CACTGGAAGG ATTTCGAAGC CCTTGTACAC CGGCTCTATG AGGCGGTCTC GCACCGCGGG
GTGACCTTGG CTGAAATCAA TCCGCTTATC CTCACTGATC ACGATCACTG GCTCGCCCTC
GACGGCAAGG TCGAACTCGA CGACAATGCC GTCGAGCTCC AGCCGGAGCT GGCCTCCCTC
TATCAACCCG AGCACGCCAC CGACCAGGAG AATACCGCCC GGAACGCCGG GCTGAGCTAC
CACACCCTCA ATGGGCGGGT TGGGCTCATG GTCAACGGGG CGGGACTGGC CATGGCCACC
ATGGACATGC TCAATTTTGC CGGTCTTCCG GCGGCAAACT TCTTGGATGT CGGAGGCGGG
GCCGATGAAG AGCGGGTCGG GGCCGCGCTG GACCTCCTTT TCGGCGATCA ACGGGTGCAA
ACGGTCCTGA TCAACATCTT CGGCGGCATT CTGTCCTGCA GCAAGGTCGC CAGCGCCTTG
ATTGCGGCCT TAGAACACCG GGAGGTGGTC AAGCCGCTGG TTGTGCGCTT TGACGGCCAC
GGCGCTGAAG AGGGGCGGCA GCGGTTGCGC CACGCGGGAC ATGCGACCGT CACTGTCGTG
GAAACTTTGC AGGACGCGAT GGACGCTTTG ACCCGCCAAA CAGGCCAGAG CGATGCCGCT
GAACGTCTCC TGCCCCCCCA AGCCTATCCC GCACGGCCGC CGGCCAAGGG CTCGGCCGCC
CTGGTTCCGC CAAGCGATCC GGGGCTTGCG GCCCTTAGCC CCAACGCGCC AGTCCTGGTC
CAGGGCCTCA CCGGCCGTGA AGGGCGTTTG CACGCCAGGT TGATGCGTGA ATACGGCACA
AATATCGTCG CCGGAGTGAC CCCGTTTAAG GGAGGAGGCA CTGTTGATGG ACTGCCTGTC
TACAATTCCG TGGCTGAAGC CACCCGTCAC CACAGTATTG CCGCCAGCAT CATTTTTGTC
CCCGCCCGCT TTGCCACAGA AGCGATGCTC GAAGCACGCC AGGCCGGCAT TCCGTGGGCC
GTGTGCGTGA CAGAAGGCAT CCCGCAAGCC CAGATACTGC CTGCTTTGCC CCAGCTGAAC
CAGGGTCCGA CACGATTTAT CGGCCCCAAC ACGCCGGGCT TTATCCGGCC GGGGCATATG
AAAGTCGGCA TCATGCCGGT CACCGCTTTT ACGCCGGGTC CGGTGGCGGT CCTCTCCCGC
AGCGGCACCT TGACCTATGA ATGTGTCGCC CGTTTGACCC AGGCCGGACT GGGCCAGTCG
TTTTGTTTCG GCATCGGTGG CGATCCCTTT GTCGGCAGTT CTTTTGTCGA TCTCTGCGCC
TTGCTGGAAA ACGACCCGCA GACTGAAGCC GTCCTTATTC TTGGAGAGAT CGGCGGACAG
GCCGAACAGG ATCTGGCTGC CTGGGTCCAG AAAACAGGCT TTCCCAAACC TATTGTCTCC
TTTATCGCCG GTCAGACAGC TCCCCCCGGG AAAAAACTCG GCCATGCCGG AGCCATTCTG
GAAGGAGCCC AATCCAACGC CGAAAAGCTG GAATCCATGC GGGCAGCGGG CTTCGGCATC
TGCCCCGATC TGGCCTCCAT CCCGGAAGCG CTCCGTCAGG CTTTGTCATG A
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| Protein sequence | MKCNEHQSKS LFKSCGIPVP QGDLVTPEMA AVYRPDFAPP FMLKAQVLRG GRGKAGGIRK
VTALQDLPGT LKEIFDMRIG DEAVPLVRVE PAAGIAREFY LSISIQRALA APVLTVGREG
GVDIEASGAD NLLIQPLDPC LGLRAHHVRS AFFHLGVDND HWKDFEALVH RLYEAVSHRG
VTLAEINPLI LTDHDHWLAL DGKVELDDNA VELQPELASL YQPEHATDQE NTARNAGLSY
HTLNGRVGLM VNGAGLAMAT MDMLNFAGLP AANFLDVGGG ADEERVGAAL DLLFGDQRVQ
TVLINIFGGI LSCSKVASAL IAALEHREVV KPLVVRFDGH GAEEGRQRLR HAGHATVTVV
ETLQDAMDAL TRQTGQSDAA ERLLPPQAYP ARPPAKGSAA LVPPSDPGLA ALSPNAPVLV
QGLTGREGRL HARLMREYGT NIVAGVTPFK GGGTVDGLPV YNSVAEATRH HSIAASIIFV
PARFATEAML EARQAGIPWA VCVTEGIPQA QILPALPQLN QGPTRFIGPN TPGFIRPGHM
KVGIMPVTAF TPGPVAVLSR SGTLTYECVA RLTQAGLGQS FCFGIGGDPF VGSSFVDLCA
LLENDPQTEA VLILGEIGGQ AEQDLAAWVQ KTGFPKPIVS FIAGQTAPPG KKLGHAGAIL
EGAQSNAEKL ESMRAAGFGI CPDLASIPEA LRQALS
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