| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0538 |
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| Symbol | |
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| ID | 8418346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 647671 |
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| End bp | 648882 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037102 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_003197413 |
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| Protein GI | 258404671 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCT GGACCATCAT CCTCGCCGGC GGTAGCGGCT CACGCCTCGC CGAAGCCACA
AGCGGGGTCA AGAAACAATT CCTGCACTAT CTTGGCCGGC CGCTATTGTG GCACAGTGCC
GCCACGTTTG CCGCCATGCC AAGCATCGAA GGCATTGTCA TGGTTGCTCC GGCAGAGGAA
TTGGAAACCG CGCGCGCGCT GTTCAACGAG TGTGCGGCCC AATCGCCCCT GGGAGTCCCG
GTGCGGTGGA CCGTTGGCGG CAGACGCCGC CAGGATTCCT CGGCCCAGGG GCTGGCTTCC
CTGCCGGCCG AGTGCCGCCG CGTCCTGATC CACGACGCTG CCCGCCCCTT TGTCAGTGCC
CCCCTCACGC AACGCGTCCT GGACGCCTTG GAATGTTTTG ACGGTGTCGT GCCCGGGATT
CCAGTCACCG ACACCATCAA ACAGGCCCAA CAAGACTTGG TCAGCACCAC CCTCCCTCGC
CATGAACTCT TTGCAATTCA AACCCCTCAG GGGTTTCGCA CCGCTGCGCT TGACCAGGCC
CACAAAACAG TCGCTGACCA CGGCATTGAC GTTACCGATG ACGCCTCCAT GCTCGAGTAT
AGCGGCGGTC GTGTCGGGGT CGTTGCCGGA GAGCGGAGCA ATTGCAAAAT CACCACCGCC
GAGGACTTGC GTATGTTGAC CGCTTCTCCT TCGACCCGGA TCCCGTGCAC CGGTTGGGGC
TACGATGTAC ACCGCTACGG AGCGGGCAGG CCCATGAAAC TCGGCGGGAT CCCGATCACC
AATGGCCCGG AGATCATCGC CCATTCCGAC GGCGACGTCC TGCTCCACGC TCTGATGGAT
GCCCTGCTTG GATGTTTGGG GGCCGGAGAT ATTGGCGAAC ATTTTCCCGA CACGGACCCC
CGGTGGGACA ACGCCAACAG CAGTGCCCTG CTTACCGACG TTTTGGACTG GTGCCGTTTC
AACGGACTCA TCCTGCGGCA CGTCGATATG ACTGTGGTTT GTCAAACCCC GAAACTGCAA
CCCTGGAAAC ACCAGATCCG AAAAACCGTG GCCGCGCTCC TCGGTCTGGC TGAACACCAT
TGCAATCTGA AGGCGACTAC TGAAGAAGGG CTCGGATTTA CTGGACACAA AGAAGGCATC
AAAGCGATCG TCCTGGTGAC AGGAGAACGG GAAACCCCGA CCCACGAATC CACTTTTCCA
GAGTCCCGGT AA
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| Protein sequence | MSTWTIILAG GSGSRLAEAT SGVKKQFLHY LGRPLLWHSA ATFAAMPSIE GIVMVAPAEE
LETARALFNE CAAQSPLGVP VRWTVGGRRR QDSSAQGLAS LPAECRRVLI HDAARPFVSA
PLTQRVLDAL ECFDGVVPGI PVTDTIKQAQ QDLVSTTLPR HELFAIQTPQ GFRTAALDQA
HKTVADHGID VTDDASMLEY SGGRVGVVAG ERSNCKITTA EDLRMLTASP STRIPCTGWG
YDVHRYGAGR PMKLGGIPIT NGPEIIAHSD GDVLLHALMD ALLGCLGAGD IGEHFPDTDP
RWDNANSSAL LTDVLDWCRF NGLILRHVDM TVVCQTPKLQ PWKHQIRKTV AALLGLAEHH
CNLKATTEEG LGFTGHKEGI KAIVLVTGER ETPTHESTFP ESR
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