Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0536 |
Symbol | |
ID | 8418344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 644879 |
End bp | 645916 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645037100 |
Product | ApbE family lipoprotein |
Protein accession | YP_003197411 |
Protein GI | 258404669 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAGA CTGCAAGCAA CGACGTCCAA TCCACACGCC GCTCTTGTCT GAAATTCCTT GGTCTCGGCG CCTTGGGGAT CGCCACACCT ATGCTCGCCG CGCGCCCCGG ACAAGCGGCC CAGGATCTGC CTCAGGCGCA AAGCACTCGT CCCTTGATGG GGACCATGGT CACGGTCACG GTTCTGGATT CCTCCCGTGA CAAGGCCCAT GAAGCCGCGC AAAGCGCCCT GGACACCATG CAGGCCCTAA CCCCGGTGCT GGACCGCCAC GCACCCGGGA CACCTTTGAG TGAACTCAAT GCCCAGGGCC GGTTGAAGGA TGTGCCGCCG CAACTCGCCG CCGTATTGTA CCAGGCTGGC TATTTCTATA CTGTCAGCCA GCGGGCCTTT GATGCGAGTA TCCTGCCCCT GTTGACCCTG ACCAAAGAGA CCTTTGCGAA CCACGGTGAG GCCCCCTCGG AGACGGCCGT ACGCCGGGTC CGCGACCGTA TCGGGTTCGA TAAGGTCCAC ATTGGCCCCG ACGGCGTGCA ACTCCAGGAC GGCATGCAGC TGACCCTGGA CGGTATCGCC AAAGGGCATA TCATCGATCA GGCGGCCAAT ACCTTACAAC AAATGGGGAT CCGCTACGCC CTGATCAACG CCGGAGGCGA TATCCGGGCC CTGGCTGGCA AAGGCCCCGG TGCAGCGTGG CGGGTCGGGA TCAAAGATCC ACGAGGCCGC AAACCGTTTA TCCAGACCAT GGCTCTTAAT AATGGGGCTC TGGCGACGTC CGGCAACTAC GAACACTATT TCGACCGCAA TAAGGCCCAC CACCATATTA TTGACGCCAA TTCCGGCCAT TCCCCGCGGG CAGTCAGCAG TGTCAGCGTG GTCGCGCCTA CAGTGGCAGA AGCCGACGCC CTGTCCACCA CCCTGTTTGT CAAACCGCGT CCAGAGGCCG TCGCCTTTGC CAATTCGCTT CCGAATACCG AGGCCCTGCT TCTCGACGAC GAACTGCGTG AAACGCACAC GCAGGGATGG CTGGGGGAGT GGGCCTAA
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Protein sequence | MSKTASNDVQ STRRSCLKFL GLGALGIATP MLAARPGQAA QDLPQAQSTR PLMGTMVTVT VLDSSRDKAH EAAQSALDTM QALTPVLDRH APGTPLSELN AQGRLKDVPP QLAAVLYQAG YFYTVSQRAF DASILPLLTL TKETFANHGE APSETAVRRV RDRIGFDKVH IGPDGVQLQD GMQLTLDGIA KGHIIDQAAN TLQQMGIRYA LINAGGDIRA LAGKGPGAAW RVGIKDPRGR KPFIQTMALN NGALATSGNY EHYFDRNKAH HHIIDANSGH SPRAVSSVSV VAPTVAEADA LSTTLFVKPR PEAVAFANSL PNTEALLLDD ELRETHTQGW LGEWA
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