Gene Dret_0532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0532 
Symbol 
ID8418340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp642419 
End bp642994 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content51% 
IMG OID645037096 
Productelectron transport complex, RnfABCDGE type, A subunit 
Protein accessionYP_003197407 
Protein GI258404665 
COG category[C] Energy production and conversion 
COG ID[COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 
TIGRFAM ID[TIGR01943] electron transport complex, RnfABCDGE type, A subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAT ACCTTTTGAT GATCGTATCC GCGGTCTTCA TCAACAATAT CATCCTGTTG 
CAGTTTCTCG GACTGTGCCC GTTCGTGGGT GTGTCCAACA AAATGGACTC CGCAATCGGG
ATGTCTGCTG CGGCCATGTT CGTTAACGTT CTGGCCAGTT CCATCTGCTG GATTATCCAA
AAATATGTGC TCGTCCCGTT GGATCTCGTG TATTTACAGA CCTTGGCCTT TATTGTGGTC
ATCGCCACAC TGGTCCAATT GGTTGAGATT GTCCTGCAGA AAATTGCGCC GCCATTGTAC
CGGTCTCTCG GTATTTATCT GCCGCTGATC ACCACGAACT GCATGATCTT CGGTGTGGCC
GTCCTCAATA TCCGTGAAGA ACATACCTTT ATGCAGGCCG TGGTGTATGC CTTTTCCACA
GCACTTGGCT TCAGCCTGGT GTTGATCTTT ATGGCCGGAC TGCGCGAGCG GTTTACCATC
TCGCGGATAC CCCAGGCGAT GCAGGGGTTT CCTATCGCGT TGGTGACGGC CTGTATGATG
GGTTTGGCAT TCTTCGGCTT AATCGGTTTG GCCTAA
 
Protein sequence
MQEYLLMIVS AVFINNIILL QFLGLCPFVG VSNKMDSAIG MSAAAMFVNV LASSICWIIQ 
KYVLVPLDLV YLQTLAFIVV IATLVQLVEI VLQKIAPPLY RSLGIYLPLI TTNCMIFGVA
VLNIREEHTF MQAVVYAFST ALGFSLVLIF MAGLRERFTI SRIPQAMQGF PIALVTACMM
GLAFFGLIGL A