Gene Dret_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0530 
Symbol 
ID8418338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp641171 
End bp641761 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content55% 
IMG OID645037094 
Productelectron transport complex, RnfABCDGE type, G subunit 
Protein accessionYP_003197405 
Protein GI258404663 
COG category[C] Energy production and conversion 
COG ID[COG4659] Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 
TIGRFAM ID[TIGR01947] electron transport complex, RnfABCDGE type, G subunit 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGTAC GTGAAATTCT CCGCATGATG CTGGTACTCA CGGTGGTCAC CGCCGTTTGC 
GGCGGCGGCT TATCCTTGGT CAAAATGGCT ACAGAGGGAC AAATTCAGTA CCAGAAGTTG
AAGAACGTCA AGGAACCGGC ACTGAAACAG GTTCTGTCCG GCTATACGAA CGATCCCTTG
ACGGATCGCA AGGAAATAGT TGTTGGCGAG GACGAACGGG GCACGCCCAT CAAACGTCCG
GTTTTTTATG CCAAAAAAGA TGGGACCCTT ATTTCCGTGG CCCTGGAAGC CTATGGCGGC
GGCTATGACG GCGATATTGG CGTGATGGTG GCCTTTGACC CGGATGAGGA TACTTTGGAG
GGGGTTGCCG TGACCACCCA TACCGAGACT CCCGGTATTG GGAGCAAGGT CAAGGAGGAC
CCCGGCTTCG CCAAGCAGTT CGAGGGCAAG TCCATCGATC AGAGCTTTGC GCCTGGCAGC
GGCACCGTCG ATGCCATCTC CGGAGCGACA TTCTCGTCGC ATGGGGTGAT GAAGGCCGTG
GATAAAGCGA TAGAAATCTA CAAAGCCAAT AAGTCGAAGA TCCTCGGTTA G
 
Protein sequence
MSVREILRMM LVLTVVTAVC GGGLSLVKMA TEGQIQYQKL KNVKEPALKQ VLSGYTNDPL 
TDRKEIVVGE DERGTPIKRP VFYAKKDGTL ISVALEAYGG GYDGDIGVMV AFDPDEDTLE
GVAVTTHTET PGIGSKVKED PGFAKQFEGK SIDQSFAPGS GTVDAISGAT FSSHGVMKAV
DKAIEIYKAN KSKILG