| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0521 |
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| Symbol | tgt |
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| ID | 8418329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 631422 |
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| End bp | 632537 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645037085 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_003197396 |
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| Protein GI | 258404654 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACATA TCGGTTCATT TCAGATCCAC CACACAGATG GTCCCGCCCG GAGCGGCGAA
CTGGTCACCG CACACGGCGT GGTGCCCACG CCGATCTTCA TGCCGGTTGG TACCCAGGGG
ACCGTGAAGA GCCTGAGCCC GGACGACCTT GAAAATCTCG GGGCCAGAAT CATCCTCGGC
AACACCTACC ACCTCTATCT CCGTCCCGGA GACGAACTTG TGGCCCGGCG TGGCGGCCTG
CACCGTTTTG CCAATTGGCC TCATCCCATC CTCACCGACA GCGGGGGCTT TCAGGTTTTC
AGCCTGGCCG GACTCCGGGA ACTGTCCGAA GAGGGCGTGA CCTTTCGCTC CCATATCGAC
GGCTCGAAAC ACTTTTTCTC TCCAGAAAAA GTCATCGATA TCCAGCGCAA TCTGGGCTCG
GACATCATGA TGGTCCTGGA CGAATGCGTT CCCTACGGCG CTGACCACGC CTACACCGAA
AAATCCCTAC AGCTGACCAC ACGCTGGGCA AAACGGTGCC GTGAGGCCTA TCCCCGCGGG
GCAGGCGACC AATTGGTGTT CGGAATCGTT CAGGGAGGAT TTTTTGAAGA CTTGCGGCGG
CAAAGCGCTG AACAGATCTG CGCTTTGGAT TGTGAAGGGT TTGCCATTGG CGGTCTCTCC
GTCGGAGAAT CCAAACAGGA AATGCACGAC ATTTTGCAGT GCACCGCCCC CCTGCTTCCG
TCGGCCAAAC CCCGCTATCT CATGGGCGTC GGCACACCGC TGGATATCCT CAACGGCATC
GCCGCGGGTG TGGACATGTT CGACTGCGTC CTGCCCACCC GCAACGCCCG CAACGGCACG
TTGTTCACCT CCCAGGGCAA GGTGAATATC AAACGCGCCG AATATCAAGA AGATGATTCA
CGCCTGGATC CCGCCTGCGG CTGCTATACC TGCCGCACCT TTTCCAAGGC GTATCTGCGC
CATTTGTACA CAAGCCGGGA ATTGCTCTCC TACCGACTGA ACACCATCCA CAACCTGACT
TTTTTTCTCG ATCTCGTCTG CGGCGCGCGG GAAGCGATTG CTGCGGGGAC CTTTGCAAGC
TACAAAAAAG GATTTGAAGC GGTCTACGAG ACCTGA
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| Protein sequence | MTHIGSFQIH HTDGPARSGE LVTAHGVVPT PIFMPVGTQG TVKSLSPDDL ENLGARIILG
NTYHLYLRPG DELVARRGGL HRFANWPHPI LTDSGGFQVF SLAGLRELSE EGVTFRSHID
GSKHFFSPEK VIDIQRNLGS DIMMVLDECV PYGADHAYTE KSLQLTTRWA KRCREAYPRG
AGDQLVFGIV QGGFFEDLRR QSAEQICALD CEGFAIGGLS VGESKQEMHD ILQCTAPLLP
SAKPRYLMGV GTPLDILNGI AAGVDMFDCV LPTRNARNGT LFTSQGKVNI KRAEYQEDDS
RLDPACGCYT CRTFSKAYLR HLYTSRELLS YRLNTIHNLT FFLDLVCGAR EAIAAGTFAS
YKKGFEAVYE T
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