| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0518 |
|---|
| Symbol | |
|---|
| ID | 8418326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 629707 |
|---|
| End bp | 630300 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645037082 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_003197393 |
|---|
| Protein GI | 258404651 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAAA TGATGGTCGC GATAGGTGTT TTCGTCTGCG CCTGTCTGGT CGCTGGATCC
GTTCCTGCCC AGGTGGAAAC GGTGTATTCG GTCGGCCAGC TCAAGCCGGT GGACAGCGAA
CTCAAAGTCG CTGTCGGTGA CGCCGCTCCG GATTTCGCCT TGCCGGATCT GCAGGGCGAA
ACAGTGCGGT TGTCCTCCTT TGAAGGGGAG AAAAACGTCA TCCTGTCCTT TGTCCCGGCC
GCGTTCACCC CGGTGTGTTC AGACCAGTGG CCCGGGTATG ATCTCATGCA GGATATTTTT
ACGGCCCACA ATGCCATTAT TCTTGGAATC AGTGCAGACA ACACCCCGTC GCAATATGCT
TGGGTTCAGG AAATGGGCGG GGTCTGGTTT CCGGTCCTGT CCGATTTCTG GCCCCATGGC
CAAGCCGCTT CCCGTTTCGG GGTTCTGCGC TCGGACGGGA CTACGGAACG GGCCCTTTTC
CTCATCGATA CCCAGGGAAT CATCCGCTAC ATCGATGTCC ATGACATCAA TAGCCGGCCG
CGCCTGGAAC CACTGATCGA GGCGTTGGAA AATCTCTCTA CGGAGGCGCC ATGA
|
|---|
| Protein sequence | MRKMMVAIGV FVCACLVAGS VPAQVETVYS VGQLKPVDSE LKVAVGDAAP DFALPDLQGE
TVRLSSFEGE KNVILSFVPA AFTPVCSDQW PGYDLMQDIF TAHNAIILGI SADNTPSQYA
WVQEMGGVWF PVLSDFWPHG QAASRFGVLR SDGTTERALF LIDTQGIIRY IDVHDINSRP
RLEPLIEALE NLSTEAP
|
|---|
| |