| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0512 |
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| Symbol | |
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| ID | 8418320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 621721 |
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| End bp | 622965 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037076 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit ClpX |
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| Protein accession | YP_003197387 |
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| Protein GI | 258404645 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.115549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG ATACCAAGCA CAGCCAGGAC GTGCAGTGCT CTTTTTGCGG GAAATCCCAG
GACAATGTGC AACGGCTGAT TGCTGGTCCG GATGTCTATA TATGCGACGA GTGCATCGGA
CTGTGCAACG AGATCATCGC CCAGGACAAT GTCAGTGAAA GCGTTGAGGA GGGGCAGCTC
CTGCCTCCGG CGGAGATCAA GGAAGCCCTG AACGACTATG TCGTGGGCCA GGATATGGCC
AAAAAGGTTT TGGCCGTGGC CGTGCACAAT CACTACAAGC GGGTTTACTA TGCTGGCGGC
AGTGACGATG TGGAACTGGA CAAGAGCAAT ATCCTCTTTG TCGGACCGAC CGGCTCGGGG
AAAACGTTAA TGGCCCAGAC TCTGGCCCGC ATCCTGAACG TCCCTTTTGC CATTGCCGAT
GCGACGAACC TGACCGAGGC CGGATATGTC GGCGAGGATG TGGAGAACAT CCTGGTGCAG
CTGCTGCAAA ACGCCGATTA TGACCTTGAG AAGGCCTCCA AGGGCATCAT TTATATAGAC
GAGATCGACA AGGTCGCCCG CAAATCGGAC AGTCCCTCCA TCACCCGTGA TGTTTCCGGG
GAAGGGGTCC AGCAGGCCTT GTTGAAAATT ATCGAAGGCA CTGAAGCTAA TATCCCGCCC
AAGGGCGGCC GCAAGCACCC CCAGCAGGAA TTTATCCGCA TGGATACCTC GAATATCCTG
TTTATTCTCG GCGGGGCGTT TGTCGGGCTG GAGGATATCA TCCAGCAGCG CCTTCAAGGC
AGTTCCATGG GCTTTGGGGC CCGTCTCGTG GGCAAGAAGG AGATGAGCAT TGGGGATGTC
CTGCGCCAGG TCCATCCCGA AGATCTGCTC AAATTCGGCC TGATACCGGA ATTTGTCGGG
CGTATCCCGG TGGTCGCCAC GCTGGATGAA CTCAGCGAGG ACGATCTGGT CCACATCCTG
ACGGCACCGA GAAACGCGCT GGTCAAGCAA TACCAGAAGC TCTTCGAACT GGATGAAGTC
CATTTGCGGT TCACAAACAA CGCCTTGAAA GCCATCGCCA CACGTGCCCT GGCCCAAAAA
ACCGGGGCAC GCGGTCTGCG CAACGTTATG GAAACCATCA TGCTGGATCT GATGTACAAA
CTCCCATCCA TGACCGATGT CAAGGAGTGT GTGGTGAACA AGGCGGTGGT CGAAGAGGGC
AAGGATCCCA TGGTCTTCTA TCGCCAGGCA GTCAAAACAG CCTGA
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| Protein sequence | MSDDTKHSQD VQCSFCGKSQ DNVQRLIAGP DVYICDECIG LCNEIIAQDN VSESVEEGQL
LPPAEIKEAL NDYVVGQDMA KKVLAVAVHN HYKRVYYAGG SDDVELDKSN ILFVGPTGSG
KTLMAQTLAR ILNVPFAIAD ATNLTEAGYV GEDVENILVQ LLQNADYDLE KASKGIIYID
EIDKVARKSD SPSITRDVSG EGVQQALLKI IEGTEANIPP KGGRKHPQQE FIRMDTSNIL
FILGGAFVGL EDIIQQRLQG SSMGFGARLV GKKEMSIGDV LRQVHPEDLL KFGLIPEFVG
RIPVVATLDE LSEDDLVHIL TAPRNALVKQ YQKLFELDEV HLRFTNNALK AIATRALAQK
TGARGLRNVM ETIMLDLMYK LPSMTDVKEC VVNKAVVEEG KDPMVFYRQA VKTA
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