| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0505 |
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| Symbol | |
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| ID | 8418312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 613473 |
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| End bp | 614396 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037068 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_003197380 |
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| Protein GI | 258404638 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.527203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCCAGA AAGCGGAGAA GATCTGGTTC GACGGGGAAT TAGTGGACTG GGATGCGGCG
CAGGTCCATG TCCTGACCCA TACCCTGCAC TACGGCGTCG GGGTGTTCGA AGGCATCCGG
TGTTATAAAG GCTCGGATGG GCGTCCCGGC ATCGTGCGCC TCAGGGAGCA TGTCGAACGG
TTGTTCGATT CAGCTCGGGC CGTGGAAATG GAGATTCCTT TCAGCCAGGA CGAGATCACC
AAGGCCATTG AACAGACCGT GCAGGTCAAT AATCTTGCGG AAGGCTACAT CCGTCCCCTG
GCCTTTATCG GTGACGGGGT CATGGGAGTC CATCCCGGCT CTAATCCGGT GCGGGTCATC
ATCGCCACCT GGCCCTGGGG GGCATATCTT GGAGACGACG CCCTGCAAAA GGGGATTCGG
GTCCGGACAT CGAGTTTCAG CCGCCATCAT GTCAATGTCA TGATGACCAA GGCCAAGGTC
TGCGGCAATT ACGTGAATTC CGTGCTGGCC AAGCGCGAGG CCGTGGCCGA CGGCTACGAT
GAGGCCCTGA TGCTGGACGT GGACGGTTAC GTCGCCGAGG CCACCGGAGA GAATATTTTT
ATCGTCAAGC ACGGGGTATT GAAGACGCCG CCGCTGGGAC CCATCCTGGG CGGCATCACC
CGGGACTGCC TGATCACGCT GGCGCGGGAC ATGGGGTATA GCGTTATCGA GCAGCGCTTC
ACCCGTGATG AGCTCTACAA TGCTGAAGAA GCCTTTTTCT GCGGCACCGC CGCCGAAGTG
ACCCCGATCC GTGAAGTGGA CCGCAGGCAG ATCGGAGCCG GGCAGGCCGG GCCGGTAACC
CAATTGCTCC AGCAGGAATA TTTTCGCGTC GTGCGCGGGG AAAATCTGAA ATACGCCGGG
TGGCTGCACC ACTTTGACAG CTAA
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| Protein sequence | MVQKAEKIWF DGELVDWDAA QVHVLTHTLH YGVGVFEGIR CYKGSDGRPG IVRLREHVER
LFDSARAVEM EIPFSQDEIT KAIEQTVQVN NLAEGYIRPL AFIGDGVMGV HPGSNPVRVI
IATWPWGAYL GDDALQKGIR VRTSSFSRHH VNVMMTKAKV CGNYVNSVLA KREAVADGYD
EALMLDVDGY VAEATGENIF IVKHGVLKTP PLGPILGGIT RDCLITLARD MGYSVIEQRF
TRDELYNAEE AFFCGTAAEV TPIREVDRRQ IGAGQAGPVT QLLQQEYFRV VRGENLKYAG
WLHHFDS
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