| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0502 |
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| Symbol | |
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| ID | 8418309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 609460 |
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| End bp | 610893 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645037065 |
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| Product | glutamyl-tRNA(Gln) amidotransferase, B subunit |
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| Protein accession | YP_003197377 |
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| Protein GI | 258404635 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.850401 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCGT ACGAGCCCGT TATTGGGCTG GAAGTCCACG CCCAGCTCAA GACCGCCTCG
AAGATATTTT GTTCCTGTTC CACTGCCTTT GGAAGGGAGC CGAACAGCAA CACCTGCCCC
GTGTGTACCG GGATGCCCGG CGTCCTGCCA GTGCTGAACA AGCGCGCCGT TGAATTCGGA
GCCAAGATGG CCCTGGCAGT GGAATGCCGG GTGAATCCGC GTTCCATATT TGCACGAAAA
AATTATTTTT ATCCCGATCT GCCGAAAGGG TACCAAATAT CGCAGTACGA AGAGCCGCTG
GCGGAATTCG GCCGGTTGTC CATTTCCATG GGCGAGGCGA TCAAAGAGGT GGGCATCACC
CGCATCCATA TGGAGGAGGA TGCCGGTAAA TCCCTGCACG GCACCGGGGA CAGGACAAGC
TATGTGGATC TCAACCGTAC GGGGGTGCCG CTTCTGGAAA TCGTGAGCGA ACCCGATATG
CGCTCTCCGG AAGAGGCGGT GGCGTATCTG AAGGCGTTAC GAGCCATCCT GGTCTATCTT
GATATTTGTG ATGGGAACAT GGAAGAGGGG AGCTTTCGCT GCGACGCCAA TATCTCTTTG
CGGCCGCAGG GACAGGAAGC GTTCGGCACC CGGACCGAAC TGAAGAATCT GAATTCGTTC
CGTCATGTGC AACGGGCCTT GGAATACGAG ATCGCCCGCC AGGAAGATAT CCTTGACGAT
GGCGATGCCG TGGTCCAGGA AACCCGGCTG TTTGATGTCG ACAAAGGCGT GACCCGGAGT
ATGCGGGGCA AGGAAGAAGC CCATGATTAC CGGTATTTCC CGGACCCTGA TCTGGTGCCC
TTGTGCCTTG ACGAAAGCTG GTTGACGACG TGGGGGGCAG AGCTTCCGGA ATTGCCCGAA
GCCAAACGGC GCAGGTTTCT CGATGACTAC GAACTCTCCC TCGATGACGC CCAGACCCTG
ACCGGTGAAC GGGAATTAGC CGAGTATTTC GAGGCGGTTG TCGCCGCCGG TGCTTCGGCC
AAGGCAGCTG CGAACTGGAT GCTCACGGAG ATGCTGCGCG AAATTCGGGA AGCCGGGCTG
GCCCCCGGCG AGGTTTGTTT CAGGCCTGAA CAACTGGCCG CATTGCTGGA TCTGATCGAG
AAGCAGACCA TCAGCCGGAA GATCGCCAAA GATATTTATC CGGAAATTTT CCGGGAGGGA
CTGGATCCCG AGCAATATGT CCAGGACAAA GGATTGGTGC AGATTTCCGA TACCAGCGCC
CTGGAGGCCG TGGTCCAGGA GGTCATCGAC GAAAACCCCG CCGAGGTGGA AGCCTATCAG
GGCGGCAAGA AAAAACTCGT CGGCTTTTTT GTCGGCCAGG TCATGCGCAA GACGCAGGGA
CAGGCAAATC CCAAGCTGGT CAATGAGCTT TTGGCCAAGC GGCTGGATTC GTGA
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| Protein sequence | MSAYEPVIGL EVHAQLKTAS KIFCSCSTAF GREPNSNTCP VCTGMPGVLP VLNKRAVEFG
AKMALAVECR VNPRSIFARK NYFYPDLPKG YQISQYEEPL AEFGRLSISM GEAIKEVGIT
RIHMEEDAGK SLHGTGDRTS YVDLNRTGVP LLEIVSEPDM RSPEEAVAYL KALRAILVYL
DICDGNMEEG SFRCDANISL RPQGQEAFGT RTELKNLNSF RHVQRALEYE IARQEDILDD
GDAVVQETRL FDVDKGVTRS MRGKEEAHDY RYFPDPDLVP LCLDESWLTT WGAELPELPE
AKRRRFLDDY ELSLDDAQTL TGERELAEYF EAVVAAGASA KAAANWMLTE MLREIREAGL
APGEVCFRPE QLAALLDLIE KQTISRKIAK DIYPEIFREG LDPEQYVQDK GLVQISDTSA
LEAVVQEVID ENPAEVEAYQ GGKKKLVGFF VGQVMRKTQG QANPKLVNEL LAKRLDS
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