Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0501 |
Symbol | |
ID | 8418308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 608218 |
End bp | 609456 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645037064 |
Product | MltA domain protein |
Protein accession | YP_003197376 |
Protein GI | 258404634 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2821] Membrane-bound lytic murein transglycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCCTG CGAAATGGTA TGAACACCGC GTACTGCGGT GGATGGCTGT GGGGATCTGG TGTTGTGCTT TGAGTCTGGT CCTGAGCGGG TGTCGCGGGC CGGTCCCTGA GCCTCCCCTG CAAAAGGGGT ATGTCGCCGT TTCCCGGGAT GAGGCTGCGG CCCTGAGCCG GCAGGCGGTA CAGTACTTAT TGGCGGCGAC CACCGAGGAA GAACTGGCCA CAGCAACACG CCGGAGTTTG GCCTATGTCC GGACCCGGCC GCCCCGGGCC ATGGCTCTGG AGACCTCCAA CCTGCGCGTG ACCTGGCACC GCCTGCAGCG CTCTTTGGAG CTTTTTCTGG AGCTGCTGCC GCGCATCGCG CGGCAGCCAG AGCTCCTGGC CCGCCATTTC GAGTGGTACG CCCTGCGCCC GGGGCCGCTG TTCACCGGCT ATTACGAACC GGAATTGCAG GCGGCCCTGG ACAAGCGTCC CGGTTACGAA ACCCCGCTTT ACCGCCGTCC CGAGGATCTG CAACAGGTGG ACCTGGGGCG CTTCCATCCG CGCTGGGACG GGCAAACCTT GCGATACCGA GTGGTCAACG GAAGCATCGC GCCCTATTTT GACCGCCAGG CGATCGAGAG CCAGGACGCG TTGTCCGGAC GGGGGCTGGA ACTGGCCTGG GCCAAAGATC CTGTGGACGT CTTTTTTCTT CAGATTCAGG GATCCGGACG GCTGCGTCTG CCCGACGGTC GCATCCAGCA TGTGCGCTAC GCCGGAGCCA ACGGCCGCCC CTACGTCTCC CTGGGGCGGG TCCTGATCGA AAAGGGGCTG CTGGATTCCG GAAACGTCAG CATGCAGTCC ATCCGGCGGT TTTTGAATGC CCATCCGGAG AGACGGCAGT CTCTTTTGAA CACCAACCCG AGCTATGTCT TTTTTGAGAA GGCCGCGGAC GGGCCGTATG GGGCCATGGG CAGACGGTTG ACCCCCTTTG TCAGCCTGGC CACGGATCGG TCCGTTTTGC CCCTGGGAGG GCTGACCGTC TGGAATGCGG ACTTGCCAGC TGCTCAGTCG AACAGTACAG TCCCCTTCAC CTCATTGGGA CTGACCCAGG ATGTGGGCGG AGCAATCACC GGCCACCATT TCGATCTGTA TTGCGGCAGC GGGGATCAAG CCGGCGCTTT GGCCGGCCGG CTCAAGGACC GCGGCCGCAT CTTCTTTTTA CTCGCCACCA ACGCCACGCA ACCGGATGTG AAGGAGTAG
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Protein sequence | MRPAKWYEHR VLRWMAVGIW CCALSLVLSG CRGPVPEPPL QKGYVAVSRD EAAALSRQAV QYLLAATTEE ELATATRRSL AYVRTRPPRA MALETSNLRV TWHRLQRSLE LFLELLPRIA RQPELLARHF EWYALRPGPL FTGYYEPELQ AALDKRPGYE TPLYRRPEDL QQVDLGRFHP RWDGQTLRYR VVNGSIAPYF DRQAIESQDA LSGRGLELAW AKDPVDVFFL QIQGSGRLRL PDGRIQHVRY AGANGRPYVS LGRVLIEKGL LDSGNVSMQS IRRFLNAHPE RRQSLLNTNP SYVFFEKAAD GPYGAMGRRL TPFVSLATDR SVLPLGGLTV WNADLPAAQS NSTVPFTSLG LTQDVGGAIT GHHFDLYCGS GDQAGALAGR LKDRGRIFFL LATNATQPDV KE
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