| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0496 |
|---|
| Symbol | |
|---|
| ID | 8418302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 602772 |
|---|
| End bp | 603032 |
|---|
| Gene Length | 261 bp |
|---|
| Protein Length | 86 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645037058 |
|---|
| Product | protein of unknown function DUF448 |
|---|
| Protein accession | YP_003197371 |
|---|
| Protein GI | 258404629 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.85619 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACC AGCCCGTGAA CCATTCACGA CAACACGGCC ACCAGCCAGA ACGCATGTGT
GTCATCTGTA GGCGCCGTTT CGCCAAACAT CAGTTGCACC GGCTAGTGGC CTCAGCGGAC
TGCGACCGCC TGCTTGACGA TCCGAAACAG ACCAGGCCTG GGCGTGGATA TTATATCTGC
CCAGACCCGG CCTGCCAAAA ACGAATTTCC AAATTCCGGG GCTGGCGGAA GAAGTGCAAG
GGGGGACGGC ATGACAACTA A
|
|---|
| Protein sequence | MQNQPVNHSR QHGHQPERMC VICRRRFAKH QLHRLVASAD CDRLLDDPKQ TRPGRGYYIC
PDPACQKRIS KFRGWRKKCK GGRHDN
|
|---|
| |