| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0488 |
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| Symbol | |
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| ID | 8418294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 593622 |
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| End bp | 594767 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645037050 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_003197363 |
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| Protein GI | 258404621 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.326664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCGA CACCGACCGT CTGGATCAGT GCAGTGGAAA CCTCGGCAGA CATGCACGGA
GCCAGAGTCA TGCGCAGTCT GCAAGCCCGG TACCCCGGCC TGCGCTTTCG CGGAGTCGGC
GGCCCGGCCA TGCGCCGGGC CGGGCTCGAC GCCGTGGCCC GGGCCGAAGA CTTGTCGGTC
ATGGGGCTGA CCGAAGTCCT CGAATTTCTG CCACGGATTC TCAAAATCCT GCGCCGCGTC
AAACGGGAAC TGGCCGCCAC AGCCCCGGTG GCCGTGGTCT GCATCGACGC GCCTGATTTC
CATTTTCCGG TGGCCAAACG GGCCGCACGC CTCAAACTCC CAGTGGTGTA TTATGTGGCG
CCCCAGGCCT GGGCTTGGCG CAAAAATCGG GTCACATTCC TGCGCCGGTA CGTCGACCGG
CTCATGTGCC TGCTCCCTTT CGAGGAATCT TTTTTCCGTG ACTACGGGGT CAACGCCCGA
TTCGCCGGGC ACCCCTTGCT GGAGGACATG GCCGAGCACA ACGCCGCTCC TGGCCATCCG
GAGTCTGCCG TCCTGGCAAT TCTGCCCGGG AGCCGGCACA AGGAAATCCA CTCTCTGCTG
CCCCCCTTTC TGGACACGGT CCGCCGCCTC CACCACGCCC ACCCGGATCT CTCCTGCCGC
CTCATTCAGG CACCCGGCAT AGCCGCAGAA ACGTTGCTCG AACACTGGCC GGAATCTGTG
CCGGTCGAAC TCGTTACAGC CGAGGCGCGG TGGGCAGCTC TGTCCACGGC CACTGTCGCC
CTGGCCGCAT CAGGCACCGC AACCCTGGAA TGTGCCCTGT TGGGCCTGCC CACGGTCGTG
GCCTACAAAG TGTCCCAGGT GAGCTACGCC ATCGGCAAAC GATTGGTTGA CGTCCCCTAT
ATCAGCCTGC CCAATCTGAT CATGGACAAA CCGTTATTTC CTGAATTTTT GCAGGACGAT
GTCTGTGCCG ACCAACTCAG CCAAGCGCTC GAACAGTGGC TGGTCTCGCC AGAAGACCGC
ATGCAGACCC GCTCCGAACT CCAAGGGTTG CGCCACAGAC TCGGTGGCAG GACCGCCTCT
GAGGAGGTGG CCGAAGCGGT CCTGGAAGTC GCCGGACTGG CCACACCCGG CACAAGACAC
CCCTAG
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| Protein sequence | MTATPTVWIS AVETSADMHG ARVMRSLQAR YPGLRFRGVG GPAMRRAGLD AVARAEDLSV
MGLTEVLEFL PRILKILRRV KRELAATAPV AVVCIDAPDF HFPVAKRAAR LKLPVVYYVA
PQAWAWRKNR VTFLRRYVDR LMCLLPFEES FFRDYGVNAR FAGHPLLEDM AEHNAAPGHP
ESAVLAILPG SRHKEIHSLL PPFLDTVRRL HHAHPDLSCR LIQAPGIAAE TLLEHWPESV
PVELVTAEAR WAALSTATVA LAASGTATLE CALLGLPTVV AYKVSQVSYA IGKRLVDVPY
ISLPNLIMDK PLFPEFLQDD VCADQLSQAL EQWLVSPEDR MQTRSELQGL RHRLGGRTAS
EEVAEAVLEV AGLATPGTRH P
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