| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0477 |
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| Symbol | |
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| ID | 8418283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 582092 |
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| End bp | 582928 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037039 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_003197352 |
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| Protein GI | 258404610 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.225572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGTAC GCAAGCTATT GGCAGTGATG ATTGGTTGCG TGATGGCAGT GGCCCTTTTG
GGGACGGCGG CCCAGTCAGC GGATGTGCGC GAAGCCCTGA GCCAGGCAAG CGCACTGGAA
CAGATCCAGA AACGAGGAAA TTTGCGGGTC GGATTCTCGA CCTTCAAGCC GTGGGCCATG
AAAAACAAGA AAGGGGAATT CATCGGCTTC GAGATTGATG TGGCCAAGGC ATTGGCCGCG
GATATGGGGG TCGAACCGGA ATTTGTGCCC ACGAAATGGT CCGGTATTAT TCCGGCATTG
TTGACCGGGA AGTTCGATAT CATCATTGGT GGCATGGGAA TTCGGCCTCA GCGCAACCTC
AAAGTGAACT TCAGTGTTCC CTACGACCAT TCCGGGATGT CCATTGTGGC CCACAAATCA
GTCGCCCCTG GGTATGAGAG TCTGGAGGAT TTCAATAAAC CCTCGGTGAC AATCGCTGCG
AGGATTGGGA CCACCGCGGC CCAGGCAGCC AAAACACATA TGCCCGAGGC CACCATCCGA
TTGTTTGATG ACGAAGCCCA AGCCCTTCAG GAGTTGTTGA CTCAGCGGGC CCACGCTATG
GTGGCCAGCC AGCCCCTGCC TGAACAGCAG GCGATACTGC ACAAGGAGCG GCTGTACCTG
CCCCTTGACG GCGAGACATT CACCACCGAA CCCATCGGTT TCGCGATCCG CAAGGGAGAT
ATTGACTTCC TGAACTTTTT GAATAATTGG GTCCGGGTCA AAAAGGCTGA AGGTTGGCTG
CAAGAGCGCC ACGCCTATTG GTTCACGACC ATGGACTGGG AGGACCAGAT CCAATAG
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| Protein sequence | MRVRKLLAVM IGCVMAVALL GTAAQSADVR EALSQASALE QIQKRGNLRV GFSTFKPWAM
KNKKGEFIGF EIDVAKALAA DMGVEPEFVP TKWSGIIPAL LTGKFDIIIG GMGIRPQRNL
KVNFSVPYDH SGMSIVAHKS VAPGYESLED FNKPSVTIAA RIGTTAAQAA KTHMPEATIR
LFDDEAQALQ ELLTQRAHAM VASQPLPEQQ AILHKERLYL PLDGETFTTE PIGFAIRKGD
IDFLNFLNNW VRVKKAEGWL QERHAYWFTT MDWEDQIQ
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