| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0474 |
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| Symbol | |
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| ID | 8418280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 579280 |
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| End bp | 579939 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037036 |
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| Product | protein-L-isoaspartate O-methyltransferase |
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| Protein accession | YP_003197349 |
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| Protein GI | 258404607 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
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| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.462994 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCAGCC TCGACACAAA TCTCCAGCGG CGTCCAGAGC GCGAAATCAT GGTACAGGAG
CAGATCGTTG CCCGGGGGAT ACGTGATTCC AGGGTGCTTG CAGCTCTGCG CGATGTCCCG
CGGCACCGTT TTGTCCCCGC GCAGTACCAG GACGCGGCGT ACGACGACGC CCCCTTGCCT
ATCGGGGACG GGCAAACCAT TTCTCAGCCG TATATCGTGG CCTATATGAC CGAACTCCTT
GAACTCCAGC CGGCAGACCG GGTGCTGGAA GTGGGGACAG GGTCCGGGTA CCAAGCGGCT
GTGGCCAGTC GCCTGGCCCA GGAGGTGTAT ACCATCGAGC GGGTGGAAAG CTTTGACGCC
CGTGTGCGCG AGGTGTTTCA CGAATTGGGC TATACCAATA TTGTTTGCCG CATTGGTGAT
GGAACCAGGG GGTGGCCGGA GGCGGCCCCG TTTGAGGCTA TCCTCGTCAC GGCCGCGGGG
CGACGTGTTC CGCAACCCCT TGTCGAGCAA CTTGCTGTGG GAGGGCGCCT TATCATGCCG
GTGGAAAACG ATCGCGGCAG GCAGGTGATC GTGCGCATGA CACGGACATC GGAGGAGGAC
TACGCACAAG AGCATTTTCT GGCCGTCGCC TTTGTTCCTC TTCTGGGTGC GTTCGCCTGA
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| Protein sequence | MVSLDTNLQR RPEREIMVQE QIVARGIRDS RVLAALRDVP RHRFVPAQYQ DAAYDDAPLP
IGDGQTISQP YIVAYMTELL ELQPADRVLE VGTGSGYQAA VASRLAQEVY TIERVESFDA
RVREVFHELG YTNIVCRIGD GTRGWPEAAP FEAILVTAAG RRVPQPLVEQ LAVGGRLIMP
VENDRGRQVI VRMTRTSEED YAQEHFLAVA FVPLLGAFA
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