| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0471 |
|---|
| Symbol | |
|---|
| ID | 8418277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 576721 |
|---|
| End bp | 578169 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645037033 |
|---|
| Product | magnesium transporter |
|---|
| Protein accession | YP_003197346 |
|---|
| Protein GI | 258404604 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) |
|---|
| TIGRFAM ID | [TIGR00400] Mg2+ transporter (mgtE) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.963916 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTATA CCGCGATCGG CATGTCCGGC ACGGGGGACC ATGCTGCGTC CTCAGTGCCT
GAGATGCCGG TGAAAAGGGA GGTCGCCATG ACCGAATCCA CTACAGTTGT CGAACACTTA
CTGGAGTGCA TAGCCAGCGG CGACGCTGAA CAGGCTGTGA CCCTCTACGA CACGTATTCG
CCGCACCCGG CCGATTGGGC CGAATACGTC GAACCGATGG GCGTCGATGC CCTGGCGCAA
TATATCGAAC TTGTTGGAGC CTCGCACGCC CTTCCGTTTT TTGAGTTCGT TTCCTTTGAA
TTGCAAAAGG AAGTCCTGCT CCGGTTGTCC CGGGAGACGT TGGCGGATCT GGTTTCCCAG
ATGAGCCCCG ATGATCGGGC GGACCTTTTG GACGATATGG AAGACGCCCT GCAGGAGCGG
ATCCTGTCGC TGCTTATTCG CGCGGAGCGT CAAAACATTA TCAAGCTCAT CAATTACGAC
GAAGACAGTG CCGGCGGGTA CATGACCACG GATTACGCCC TGATCCGTTT TGATGACACT
GTCAGTGCCG CGCTGGAACA GCTTCGCCTC CAGGCACCCA AGAAAGAGAC GATTTACTAT
ATCTATGTCG TGGATAAAGC GCTGCGGTTG ATTGGGTTCG TCTCTTTGCG GGAGTTGATC
ATGGCGCCGC GCTACAAACT CGTGCGCGAC GTGATGAGCA AAAGTGTCAT CTCGGTGCGG
GTCAATGAAG ACATCGAAGA AGTGGCCAAG AAAATGCAGC ACTACGATTT TCTGGCTATT
CCGGTGGTCT CGGAGGATGA ACGACTTGTG GGGATCATTA CCTTTGACGA CATCTATGAC
GTTATCCAGG AAGAAACAGC CGAGGACATG TACCTTTTGG CGAACCTGGA CGCTGACGAG
AGCCTGAATT CCCCGGTGGG GCGTTCCGTG AAAATGCGCG CTCCCTGGCT TTTGGTCAAT
TTGTGCACAG CGCTTTTCGT GGCCTATACA GTCGATCTTT TTTCGGACTC CATTTCCCAA
TTCGTCGCCC TGGCGGCTTT GATGCCTATC GTGGCCATGC TTGGAGGCAA TGCCGGCAAC
CAGTCCCTGA CAGTGGTCGT TCGCGCTCTG GCGCTGGGCG AGGTCCCCTT GCGGGACAAT
TGGCGGGTGC TACTCAAGGA GGCTGGCGTT GGATTTGTCA ATGGCATGCT CATCGGCGGT
GTCATGGGCG CCATCGCCTG GGCGTGGTAC GATAACGTCT GGCTTGGCCT CATCATCCTG
GTGGCCATGT CCGTTAATCT GGTGGTGGCC GGTTTTTTCG GGTCTCTGAT CCCGGTGACA
TTGCGCAAGC TTAAACTTGA TCCCGCCTTG GGATCCTCAA TATTGGTGAC CACGGCCACC
GATGTCGGCG GATTTTTGAT TTTCCTTGGA TTGGCGACGA TTTTCTTGCA GCAGCTCCTG
GGGGGCTGA
|
|---|
| Protein sequence | MKYTAIGMSG TGDHAASSVP EMPVKREVAM TESTTVVEHL LECIASGDAE QAVTLYDTYS
PHPADWAEYV EPMGVDALAQ YIELVGASHA LPFFEFVSFE LQKEVLLRLS RETLADLVSQ
MSPDDRADLL DDMEDALQER ILSLLIRAER QNIIKLINYD EDSAGGYMTT DYALIRFDDT
VSAALEQLRL QAPKKETIYY IYVVDKALRL IGFVSLRELI MAPRYKLVRD VMSKSVISVR
VNEDIEEVAK KMQHYDFLAI PVVSEDERLV GIITFDDIYD VIQEETAEDM YLLANLDADE
SLNSPVGRSV KMRAPWLLVN LCTALFVAYT VDLFSDSISQ FVALAALMPI VAMLGGNAGN
QSLTVVVRAL ALGEVPLRDN WRVLLKEAGV GFVNGMLIGG VMGAIAWAWY DNVWLGLIIL
VAMSVNLVVA GFFGSLIPVT LRKLKLDPAL GSSILVTTAT DVGGFLIFLG LATIFLQQLL
GG
|
|---|
| |