| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0468 |
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| Symbol | |
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| ID | 8418274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 573064 |
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| End bp | 574854 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645037030 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003197343 |
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| Protein GI | 258404601 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTTGC GTACCAAATT GTTGAGCGTT TTGTTGGGGC TGCTGTTCCT GGCCTCATTT
GTGCCGCTTT TTTTGTCCAA GCAGGTTCTG CATGAGGAAC TGCTGGCCGC AGCCAAGCGG
GAGGCAGTAC TCAAGCTTGG GCACATGCAG TGGCTCATGC GCAAGGGCTT GGCACAGGAA
GGCCCGGCGG GTTTGAACGA GCAGTTTCGC CAGATCGGGA AACAGCTTGA TGTCCGGATT
ACCTATATCC GCCAGGACGG GACGGTTCTC GCCGATTCCT CGCTGCCCCT GCGCAAAGTG
CGCCAACTGG AAAATCACAA GCAAAGACCG GAAGTCCAGG AGGCGATGCA GCGCCGTTTC
GGTTCTAGTC TGCGCTACAG CGAGACCTTG AAAACCGATT TGCTTTATGT GGCCCGCACC
ATGGAGGCCA CATCGGAAAT CCCGGAAGGT TTCATCCGCA TGGCCGTGCA TCTCAGCGCT
GTGGACAAAC GTCTGGACGG CCTGTTCCAG CAGTACCTGA TCCTCTTCGT TATTGGGCTG
GCAGTGTGCG CGGTGGTGAG TTTCTGGCTC GCTTCCCGCG TGAGCCGGGC CATGCTGCGC
ATGGGGCAGA CCGCCGATGC CATCGGCAAT GGGGAATACG ACAAGCGGAT TGCATTCACT
CCGGCACGGG AATTTTTACC CCTGGCTCAG GCCATCAACC GCATGGCCCG GCGCATTCAG
AGCCATATTA CGACCATCAG CGATCAGAAC CGGCAGTTCG AATCCATTTT GAATGGCATG
CACGAAGGGG TCATGGTCCT TGACCGTCAA GGCAAGGTGA GCATGGTCAA TACCGAACTC
AAGAATATTC TCGAGGTCAC CTCTCCGGTG GGAAGGGCCC CGATTGAGCT CATCCGCAGT
CCGGAACTGC AAGGCGCCTG CGAGGCAATG GTCGCTGCAA CGGTGGGTAA GCAGAGCATG
GAGCCCGCCC AATTGCAGGT CGAAACAATG CAGGAGCGGA TTTACGATGT GAATCTGTTG
CCCTTGCCAG CAGAAAGCCA GGACATCAGC GCCATCGTGG TCTTCCACGA TATCACCGAA
CTCAAACGGC TCGAGCGGGT GCGCCGGGAT TTCGTGGCCA ATGTCTCGCA TGAGCTCAGA
ACGCCGTTGA CCTCGATCAA AGGGTATGCC GAGACACTGC TTGATATGGG GCAGGTGGAG
ACCGAAGCCG TCCACGCCTA TATGCAGGTC GTGGTCAAAA ATGCCAACGC CATGTCCCGC
TTACTGGAAG ATCTGCTCCA GCTCTCGAAA TTGGAGTCCA ACGCTGGCGA CAGGGAACTC
GGCCCGGTGT TGCTGACCAA CGCCATCCAG GCGGCGTGGA AATATTGTCA ACCCATGGCC
GAGGAACACC ATGTCTCACT CAACCAGAGT CAGATCCCGG CCGGGGTGTG CGTGTGGTCC
GAATACGACC CCTTGGTCCA GGTGCTACGC AATCTGTTTG AAAATGCGAT CAAATTCAGC
CCGGAAAATA CTGAGGTCCG CATAGAAGCG GAGCAGGACG GCCCGATATG GCAGATAAGC
GTTGTGGACA GCGGTCCAGG GGTCGGGCAA CGGGAACAGG AGCGGATTTT TGAGCGGTTC
TACCGCGTCC AGCACGGCTC CAAGCAGGTC GCCGGGACGG GATTGGGACT GGCCATCGCC
CGGCATATCG TGCGCAATCA CGTTGGACGA ATCTGGGTCG AAAGCCCCGT CCCCGGTCAA
ATAGAAGGGT CAGCATTTCG CTTTACACTG CGGGAATGCT CTTCTGCGTA A
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| Protein sequence | MSLRTKLLSV LLGLLFLASF VPLFLSKQVL HEELLAAAKR EAVLKLGHMQ WLMRKGLAQE
GPAGLNEQFR QIGKQLDVRI TYIRQDGTVL ADSSLPLRKV RQLENHKQRP EVQEAMQRRF
GSSLRYSETL KTDLLYVART MEATSEIPEG FIRMAVHLSA VDKRLDGLFQ QYLILFVIGL
AVCAVVSFWL ASRVSRAMLR MGQTADAIGN GEYDKRIAFT PAREFLPLAQ AINRMARRIQ
SHITTISDQN RQFESILNGM HEGVMVLDRQ GKVSMVNTEL KNILEVTSPV GRAPIELIRS
PELQGACEAM VAATVGKQSM EPAQLQVETM QERIYDVNLL PLPAESQDIS AIVVFHDITE
LKRLERVRRD FVANVSHELR TPLTSIKGYA ETLLDMGQVE TEAVHAYMQV VVKNANAMSR
LLEDLLQLSK LESNAGDREL GPVLLTNAIQ AAWKYCQPMA EEHHVSLNQS QIPAGVCVWS
EYDPLVQVLR NLFENAIKFS PENTEVRIEA EQDGPIWQIS VVDSGPGVGQ REQERIFERF
YRVQHGSKQV AGTGLGLAIA RHIVRNHVGR IWVESPVPGQ IEGSAFRFTL RECSSA
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