| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0463 |
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| Symbol | |
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| ID | 8418269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 567533 |
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| End bp | 568303 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037025 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_003197338 |
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| Protein GI | 258404596 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.74203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCTC AGCCCAATCT GCTCGACAAT CTGACCGTTG TTCTTTTTCA GCCCAAGTTC
GCAGAAAACG TGGGCAGTAC TGCCCGTGCC TGCGCCAATC TCGGTTGCCC CAACCTGAAA
TTGGTCCAGC CCCCGGCATG GGATCTGGAG CGGGCAGCCC CCCTGGCTAC GGGACGGGGA
AAAGAGGTGC TGCACTCCCT GACCCTGCAT CCCGATCTTC CCAGCGCCTT GAGCCCGCAC
CACACCGTTT ACGGGACCAC CGCCCGGACC GGCGGATGGC GCAAAGCCAT CCGGACCCCG
GAACAGGTCG CGGAGGACGT CGCTGGCAAG CTCGCTGCCG GGCACCAGGT GGCGGTCGTC
TTCGGTCCCG AAGACCGGGG ACTGTCCAAT GAAGAAATCG ATATCTGCGG TCAACTGCTG
ACGATTCCCA CGGCCAGCGA GGCCACCTCG CTCAATCTCA GCCAAGCGGT TTTGCTGGTC
TTATACGAAT GGTTCAAAGC GAGTTCGGGG AAACGGTTTC TCCGGACCAC TCCGCCCCAA
TCCCGCTTGT GCACCCACGA AGAGCGAGAG ACCCTGCTGA CTTCAGTGCA GGAGGCGCTC
CTCCGCCTCG ATTTTTTCAA AGACGACAAC GCCGCCTATT GGATGCTCCC GGTACGGAGG
TTCTTCCAAC GCTTTGAACT CCGGCGCCAC GAATTCAATC TCCTCATGGG CATTTGCCGT
CAGGTCAAAT GGCTCGCGAC CCGCACGGAC ACCGACCGCC ATGACCCGTA A
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| Protein sequence | MLSQPNLLDN LTVVLFQPKF AENVGSTARA CANLGCPNLK LVQPPAWDLE RAAPLATGRG
KEVLHSLTLH PDLPSALSPH HTVYGTTART GGWRKAIRTP EQVAEDVAGK LAAGHQVAVV
FGPEDRGLSN EEIDICGQLL TIPTASEATS LNLSQAVLLV LYEWFKASSG KRFLRTTPPQ
SRLCTHEERE TLLTSVQEAL LRLDFFKDDN AAYWMLPVRR FFQRFELRRH EFNLLMGICR
QVKWLATRTD TDRHDP
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