Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0460 |
Symbol | |
ID | 8418266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 564090 |
End bp | 565355 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645037022 |
Product | phenylacetate-coenzyme A ligase, putative |
Protein accession | YP_003197335 |
Protein GI | 258404593 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1541] Coenzyme F390 synthetase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCGTA AGGATCGCAC AGAAGGGATC TTCAGCCGCA GAGAGGTGCT GGATGAATCC GAACGCAAAC AATATTATTT GATCCAGCTC AAAGAATTGC TCCGCTACGC GTACCGGTAT TCCGAGGACG TCAAGAAGCG GTTTGATCGG GCGCAATTCG ATGTCAATAA ATTCAGAGAG CTTTCTGACC TCAAGCACAT TCCGATCCTG AAGAAGAAGG AATTGATCTT TCTGCAGTCC ATGGGGCCGC GTCTTGGCGG GCTGTTGACC AAAGATCTTG GGGAGTTGCG CCGTATTTTC ATGTCCCCGG GCCCGATTTT CGATCCCGAG GACCGCAGCG ACGATTATTG GGGCTGGACC GAGGCTTTTT ACGCTTCCGG ATTTCGCAGC GGCGATATCG CGCAGATCAC CTTCAATTAC CATATGGCGC CGGCGGGGCT CATGTTTGAA GAACCGTTGC GCAATCTGGG GTGTTCCGTG GTGCCGGCCG GTCCAGGGTC GACGAACACG CAGTTGGAGA TCATGCAGAA GCTGCGTGTC TCCGGCTACG TCGGGACTCC GAGTTATCTG ATGCACTTGG CTCAAAAGGC CGAAGAGGCC GGGCACAACC TGCGCAAGGA TCTTTTCCTG GAAGTCGCCT TCGTGACTGG GGAAAAGCTC TCGGAAAAGA TGCGCTCCAC TCTGGAGAAA AAATTCGACA TGATCATGCG CCAGGGATAC GGCACAGCGG ATGTCGGCTG TATCGGTTAC GAGTGCTTCC ATCGCGAAGG GTTGCACGTG GCCAACCGGG CGTTTGTCGA AATCTGCCAC CCGGACACGG GGATTCCGCT CAAGGACGGC GAGGTCGGAG AGATCGTGGT CACCGCGTTC AATAAAACCT ATCCCCTGAT CCGTCTGGCC ACCGGCGATC TGGCCTATAT CGACCGCACT CCGTGCCCCT GCGGCCGGAC TTCGCCGCGA CTTGGCGGCA TTGTCGGCCG GGTGGATACC ACCGCACGCA TCAAGGGCAT GTTTGTCTAT CCCCACCAGG TCGAGCAGGT CATTTCCAAA TTTGACGAGA TCAAGCGGTG GCAGATCGAA GTCACCAACC CCGGTGGCAT CGACGAGATG ACCTTGTATG TCGAGGCCAC GGATTTTCAG CGCGGCGACG AATTGCAGCA CATGTTCCGC GAGCGGATCA AACTGCGGCC GACGTTGAAA GTGCTGGCCC CTGGCGCGTT GCCGCCGAAT GTCAAACCCA TCGAGGACAA GCGCAAATGG GATTGA
|
Protein sequence | MTRKDRTEGI FSRREVLDES ERKQYYLIQL KELLRYAYRY SEDVKKRFDR AQFDVNKFRE LSDLKHIPIL KKKELIFLQS MGPRLGGLLT KDLGELRRIF MSPGPIFDPE DRSDDYWGWT EAFYASGFRS GDIAQITFNY HMAPAGLMFE EPLRNLGCSV VPAGPGSTNT QLEIMQKLRV SGYVGTPSYL MHLAQKAEEA GHNLRKDLFL EVAFVTGEKL SEKMRSTLEK KFDMIMRQGY GTADVGCIGY ECFHREGLHV ANRAFVEICH PDTGIPLKDG EVGEIVVTAF NKTYPLIRLA TGDLAYIDRT PCPCGRTSPR LGGIVGRVDT TARIKGMFVY PHQVEQVISK FDEIKRWQIE VTNPGGIDEM TLYVEATDFQ RGDELQHMFR ERIKLRPTLK VLAPGALPPN VKPIEDKRKW D
|
| |