Gene Dret_0460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0460 
Symbol 
ID8418266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp564090 
End bp565355 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content57% 
IMG OID645037022 
Productphenylacetate-coenzyme A ligase, putative 
Protein accessionYP_003197335 
Protein GI258404593 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTA AGGATCGCAC AGAAGGGATC TTCAGCCGCA GAGAGGTGCT GGATGAATCC 
GAACGCAAAC AATATTATTT GATCCAGCTC AAAGAATTGC TCCGCTACGC GTACCGGTAT
TCCGAGGACG TCAAGAAGCG GTTTGATCGG GCGCAATTCG ATGTCAATAA ATTCAGAGAG
CTTTCTGACC TCAAGCACAT TCCGATCCTG AAGAAGAAGG AATTGATCTT TCTGCAGTCC
ATGGGGCCGC GTCTTGGCGG GCTGTTGACC AAAGATCTTG GGGAGTTGCG CCGTATTTTC
ATGTCCCCGG GCCCGATTTT CGATCCCGAG GACCGCAGCG ACGATTATTG GGGCTGGACC
GAGGCTTTTT ACGCTTCCGG ATTTCGCAGC GGCGATATCG CGCAGATCAC CTTCAATTAC
CATATGGCGC CGGCGGGGCT CATGTTTGAA GAACCGTTGC GCAATCTGGG GTGTTCCGTG
GTGCCGGCCG GTCCAGGGTC GACGAACACG CAGTTGGAGA TCATGCAGAA GCTGCGTGTC
TCCGGCTACG TCGGGACTCC GAGTTATCTG ATGCACTTGG CTCAAAAGGC CGAAGAGGCC
GGGCACAACC TGCGCAAGGA TCTTTTCCTG GAAGTCGCCT TCGTGACTGG GGAAAAGCTC
TCGGAAAAGA TGCGCTCCAC TCTGGAGAAA AAATTCGACA TGATCATGCG CCAGGGATAC
GGCACAGCGG ATGTCGGCTG TATCGGTTAC GAGTGCTTCC ATCGCGAAGG GTTGCACGTG
GCCAACCGGG CGTTTGTCGA AATCTGCCAC CCGGACACGG GGATTCCGCT CAAGGACGGC
GAGGTCGGAG AGATCGTGGT CACCGCGTTC AATAAAACCT ATCCCCTGAT CCGTCTGGCC
ACCGGCGATC TGGCCTATAT CGACCGCACT CCGTGCCCCT GCGGCCGGAC TTCGCCGCGA
CTTGGCGGCA TTGTCGGCCG GGTGGATACC ACCGCACGCA TCAAGGGCAT GTTTGTCTAT
CCCCACCAGG TCGAGCAGGT CATTTCCAAA TTTGACGAGA TCAAGCGGTG GCAGATCGAA
GTCACCAACC CCGGTGGCAT CGACGAGATG ACCTTGTATG TCGAGGCCAC GGATTTTCAG
CGCGGCGACG AATTGCAGCA CATGTTCCGC GAGCGGATCA AACTGCGGCC GACGTTGAAA
GTGCTGGCCC CTGGCGCGTT GCCGCCGAAT GTCAAACCCA TCGAGGACAA GCGCAAATGG
GATTGA
 
Protein sequence
MTRKDRTEGI FSRREVLDES ERKQYYLIQL KELLRYAYRY SEDVKKRFDR AQFDVNKFRE 
LSDLKHIPIL KKKELIFLQS MGPRLGGLLT KDLGELRRIF MSPGPIFDPE DRSDDYWGWT
EAFYASGFRS GDIAQITFNY HMAPAGLMFE EPLRNLGCSV VPAGPGSTNT QLEIMQKLRV
SGYVGTPSYL MHLAQKAEEA GHNLRKDLFL EVAFVTGEKL SEKMRSTLEK KFDMIMRQGY
GTADVGCIGY ECFHREGLHV ANRAFVEICH PDTGIPLKDG EVGEIVVTAF NKTYPLIRLA
TGDLAYIDRT PCPCGRTSPR LGGIVGRVDT TARIKGMFVY PHQVEQVISK FDEIKRWQIE
VTNPGGIDEM TLYVEATDFQ RGDELQHMFR ERIKLRPTLK VLAPGALPPN VKPIEDKRKW
D