| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0457 |
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| Symbol | |
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| ID | 8418263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 559945 |
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| End bp | 561414 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645037019 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_003197332 |
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| Protein GI | 258404590 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAAA AACGCAAACG CAAAATGTTT ATCAGTGTCC TGCCCGGCGA ACAGATTGAA
GTCGTCATCG CCCAGGACGC CAAGGTCCAA GAATACTACG TCGAAATGCT CAACCAGGCC
AAGACGAAGG GCAATATCTA CAAAGGGACC ATCAACAACA TCGACCCCGC CCTGCAAGCC
GCCTTCATCC AATACGGGGC CAAAAAGAAC GGGTTCCTCC AGGTCGACGA AGTCCACCAG
GAATATTACC AAAACGATAT CAAGCCCAAA AAAGGCTACA AGTACCCTCC GCTGCACAAG
GTCCTCAAAC CGGGGCAAGA GGTTCTTGTC CAGGTGGTCA AGGAACCCAC TGGGTCTAAA
GGGGCCTTTT TGACCACCTA TCTCTCCCTG CCCGGTCGCT ATTTTGTGCT CACCCCGGGC
CGTGAACAGA CCGGGATTTC CCGCAAAATC GATGATGAGA AGGAACGGGA ACGGCTGCGC
AAGATCATTG AAGACTTCAA GCTTGATCCC GGTATAGGGC TTATTCTGCG CACCGTAAGC
TCCAACCAGA CCAAGACCAA TCTCTCCCGC GATCTGCAAT TTCTCAAACG GCTCTGGAAA
GAGGTCCGCA AACGCGGGGT CTCTGAAAAA GCGCCCAGTT TGATCTACGA GGAAAAGGAT
CTCGCCTTTC GGGCGGTTCG CGACTACCTC ACCGATGATG TCTCCGAGGT CTGGGTTGAT
CATCAGGAGA CCGCCAAACA GATCAAAGAA TACGCCTCGC TGGCGTTTCC CCGGAGAAAC
CGCCTCGTCA AGCAGCACAC CGACGCTGAC CGCTCCCTGT TCGAACGCTT CAATCTCATC
GACCAGCTCC AGTCTGTGTA CAGCCGACAG GTCACCCTGC CCAGCGGGGG CAGCCTGGTT
TTTGACCAGA CTGAGGCGCT TATGGCCATC GACATCAACT CCGGCAAAAT CGGGGGCGAA
AGCAATTTCG CCGAGATGGC CCTGAAGACC AACCTCGAAG CGGCCGAAGA AATCCCCCAC
CAATTGCGCC TGCGAGATAT CGGGGGTCAG GTTGTGATCG ATTTTATTGA GATGAAGGAC
AACAAACACA GCCGGGACGT GGAAAAGACC CTGCGCGCGG CTGTCAAAGA CGACAAGGCC
CGCACCAGTG TTGGTCGGAT CTCCCGTTTC GGTCTTTTGG AGATGGTCCG CCAACGTATG
GGGTCCTCGG CCCTTTCTAC GACCATGGAA CCATGTCCCT GCTGCCAGGG CGCCGGCATC
CGGCGTAATC TCGAATGGCA GGCCATGCAG GCCTTGCGCG ACATCCGCTA CCAGTTGAAC
AAAAAAAACG GCGCATCCAC TCTGGATTTC CCCATTGGCA AAGAACTCGC CCTGTATCTT
TTGAATACGA AACGGGACCG ATTGACCGAA CTCGAACAGG AATTCCAGAC CACGATCACC
ATCTCCGCGA CCGACAATGC CCTTACCTAG
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| Protein sequence | MAQKRKRKMF ISVLPGEQIE VVIAQDAKVQ EYYVEMLNQA KTKGNIYKGT INNIDPALQA
AFIQYGAKKN GFLQVDEVHQ EYYQNDIKPK KGYKYPPLHK VLKPGQEVLV QVVKEPTGSK
GAFLTTYLSL PGRYFVLTPG REQTGISRKI DDEKERERLR KIIEDFKLDP GIGLILRTVS
SNQTKTNLSR DLQFLKRLWK EVRKRGVSEK APSLIYEEKD LAFRAVRDYL TDDVSEVWVD
HQETAKQIKE YASLAFPRRN RLVKQHTDAD RSLFERFNLI DQLQSVYSRQ VTLPSGGSLV
FDQTEALMAI DINSGKIGGE SNFAEMALKT NLEAAEEIPH QLRLRDIGGQ VVIDFIEMKD
NKHSRDVEKT LRAAVKDDKA RTSVGRISRF GLLEMVRQRM GSSALSTTME PCPCCQGAGI
RRNLEWQAMQ ALRDIRYQLN KKNGASTLDF PIGKELALYL LNTKRDRLTE LEQEFQTTIT
ISATDNALT
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